Pimephales promelas (fathead minnow): 120469706
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Entry
120469706 CDS
T08155
Symbol
tpcn1
Name
(RefSeq) two pore calcium channel protein 1
KO
K16896
two pore calcium channel protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120469706 (tpcn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120469706 (tpcn1)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
120469706 (tpcn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
ECSCR
Motif
Other DBs
NCBI-GeneID:
120469706
NCBI-ProteinID:
XP_039514787
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MADGDDDVPLILTWDDATSGLLEEDEHAAGNYDVVNNVVIPTPGPPDPRAQNSLRQSWEM
NYQEAAIYLQEGENNDKFFTHPRSAHALSAYLFAHNHLFYVMELLTALLLMLLSLSEAPA
VPFLRLDVYIHATLELLALALVAFELGMKLRWLGFYTFIQHKRTMVKTCVLFLQFIEAIV
VLVRQTSHLRVTRALRPIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLLLFFMVIFAIL
GFCLFSGNSADPYFSTLENSIVSLFVLLTTANFPDVMMPAYSKNRWSCIFFIVYLSIELY
FIMNLLLAVVFDTFNGVEKMKFKSLLLHKRSAMEHAFQLLLSRQRPDGVSLKQFDGLMRF
YRPRMTARDRFLTFKALNYSDATMLSLQDFYKFYEVIGLKWKARRSGEYWFDDLPRTAFL
IFKGMNLVVKSKAFQYAMYLVVAINGIWILVETNMVNDGVSWTHVVPLSYIIFLTIYGIE
VLLKITGLGPMTYFSSGWNLFDFSVTVFAFLGLIALAFDMEPFYFIVVLRPFQLLRLFKI
KQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFAGVVYPNCCKNSTVADSYRQ
INVTIGNRTVVEEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGLTSETSHWTRLYFM
TFYIVTMVRECEGENNDKFFTHPRSAHALSAYLFAHNHLFYVMELLTALCTHATVPLRAP
AVPFLRLDVYIHATLELLALALVAFELGMKLRWLGFYTFIQHKRTMVKTCVLFLQFIEAI
VVLVRQTSHLRVTRALRPIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLLLFFMVIFAI
LGFCLFSGNSADPYFSTLENSIVSLFVLLTTANFPDVMMPAYSKNRWSCIFFIVYLSIEL
YFIMNLLLAVVFDTFNGVEKMKFKSLLLHKRSAMEHAFQLLLSRQRPDGVSLKQFDGLMR
FYRPRMTARDRFLTFKALNYSDATMLSLQDFYKFYEVIGLKWKARRSGEYWFDDLPRTAF
LIFKGMNLLVKSKAFQYAMYLVVAINGIWILVETNMVNDGVSWTHVVPLSYIIFLTIYGI
EVLLKITGLGPMTYFSSGWNLFDFSVTVFAFLGLIALAFDMEPFYFIVVLRPFQLLRLFK
IKQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFAGVVYPNCCKNSTVADSYR
QINVTIGNRTVVEEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGLTSETSHWTRLYF
MTFYIVTMVVMTIIVAFILDAFVFRMNYSRKNREPLDDPEDEKGIVFETEVSQTEALQTL
DLYKHTLGVTNLSSLQDMCVALERSGHSSLVFQGRRSRTKSDLSMKMYEEEIQEWYEEYS
RTNLQPDETFHRELDSPEVNASNSIN
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggacgacgatgtgccgctgattctgacctgggacgatgcgaccagcggg
ctcctggaggaagacgagcatgcggcaggaaattatgatgttgtgaataatgttgtcata
ccgaccccaggaccaccagatcctagagcccagaattctttgcggcagagttgggaaatg
aactaccaggaagcagcaatatatctgcaggagggagagaataatgacaagtttttcact
catccacgaagtgcccacgcgctcagcgcctacctgtttgctcacaatcaccttttctat
gtgatggagctgctgactgcgctgttactcatgctactgtccctctcagaggcccctgcc
gtccccttcctgcgcttggacgtctatattcatgcgacactggagttattggcattggcg
ttggtggcatttgagttgggtatgaagctccgatggcttggcttttacacctttatacag
cataaaaggaccatggtgaagacgtgtgtcctgtttcttcaattcatcgaggcgattgtg
gtcttagtccggcagacatctcacctgcgtgtgacgagagccctgcggccgatctttttg
gtggactgccgttactgtggagccgttcgcagaaacctgaggcagatatttcagtctctt
cctcccttcattgatattcttctgctgttgcttttcttcatggtcatctttgccatcctg
ggattttgcttgttctcaggcaactcagctgacccgtattttagcacacttgagaacagc
attgtgagtctgttcgtccttctgaccactgcaaattttccagatgtgatgatgccagca
tattcgaagaatcgttggtcatgcattttcttcattgtgtatctgtccatcgagctctac
ttcatcatgaatctgctcctggcagtagtttttgacacctttaatggagtcgagaagatg
aaattcaaatctctgcttttacacaagcgatctgccatggagcacgctttccagctgctg
cttagtcggcagaggccagatggagtttctttgaagcagtttgatggactgatgcgattc
tatcgtccacgaatgactgcacgggatcgctttctcaccttcaaagccctcaactattca
gacgcaaccatgctgagtctccaggacttttataagttttatgaagtgattgggctcaaa
tggaaggctcgacggagtggggagtactggtttgatgatcttcctcgcacagcattcctc
attttcaaaggaatgaatttagttgtgaaatccaaagcttttcaatatgcaatgtatctg
gtagtagcaattaatggcatctggatcctagtggagacaaacatggtaaatgatggtgtc
tcatggactcacgttgtccctttgagttacattattttcctcacaatttatggaattgag
gtcttgttgaagatcacaggccttggtccaatgacatatttcagctcaggatggaacctc
tttgatttttcagtaacagtatttgcctttctgggattgattgctctggcctttgacatg
gagccgttctacttcattgtggtgttgagaccttttcagctcctccggttgtttaaaatt
aaacagcgctatcgtaatgttctggacacaatgtttgaactgttcccgcgtatggccagt
ctaggtctgactctgattatcttctattattcttttgccatcgttggaatggagtttttt
gctggggttgtttatccgaactgctgcaagaatagcacagttgctgactcgtatcgccag
ataaatgtgaccattggcaaccgaaccgtggttgaagagggatattactatctcaataac
ttcaataacatcctaagcagctttgtcactctttttgagctaacagtggtgaacaactgg
tacatcacaatggaaggtttgacatcagaaacttctcactggactcgcctttatttcatg
accttttacattgtcaccatggtaagggaatgtgagggagagaataatgacaagtttttc
actcatccacgaagtgcccacgcgctcagcgcctacctgtttgctcacaatcaccttttc
tatgtgatggagctgctgactgcgctgtgtactcatgctactgtccctctcagagcccct
gccgtccccttcctgcgcttggacgtctatattcatgcgacactggagttattggcattg
gcgttggtggcatttgagttgggtatgaagctccgatggcttggcttttacacctttata
cagcataaaaggaccatggtgaagacgtgtgtcctgtttcttcaattcatcgaggcgatt
gtggtcttagtccggcagacatctcacctgcgtgtgacgagagccctgcgaccgatcttt
ttggtggactgccgttactgtggagccgttcgcagaaacctgaggcagatatttcagtct
cttcctcccttcattgatattcttctgctgttgcttttcttcatggtcatctttgccatc
ctgggattttgcttgttctcaggcaactcagctgacccgtattttagcacacttgagaac
agcattgtgagtctgttcgtccttctgaccactgcaaattttccagatgtgatgatgcca
gcatattcgaagaatcgttggtcatgcattttcttcattgtgtatctgtccatcgagctc
tacttcatcatgaatctgctcctggcagtagtttttgacacctttaatggagtcgagaag
atgaaattcaaatctctgcttttacacaagcgatctgccatggagcacgctttccagctg
ctgcttagtcggcagaggccagatggagtttctttgaagcagtttgatggactgatgcga
ttctatcgtccacgaatgactgcacgggatcgctttctcaccttcaaagccctcaactat
tcagacgcaaccatgctgagtctccaggacttttataagttttatgaagtgattgggctc
aaatggaaggctcgacggagtggggagtactggtttgatgatcttcctcgcacagcattc
ctcattttcaaaggaatgaatttacttgtgaaatccaaagcttttcaatatgcaatgtat
ctggtagtagcaattaatggcatctggatcctagtggagacaaacatggtaaatgatggt
gtctcatggactcacgttgtccctttgagttacattattttcctcacaatttatggaatt
gaggtcttgttgaagatcacaggccttggtccaatgacatatttcagctcaggatggaac
ctctttgatttttcagtaacagtatttgcctttctgggattgattgctctggcctttgac
atggagccgttctacttcattgtggtgttgagaccttttcagctcctccggttgtttaaa
attaaacagcgctatcgtaatgttctggacacaatgtttgaactgttcccgcgtatggcc
agtctaggtctgactctgattatcttctattattcttttgccatcgttggaatggagttt
tttgctggggttgtttatccgaactgctgcaagaatagcacagttgctgactcgtatcgc
cagataaatgtgaccattggcaaccgaaccgtggttgaagagggatattactatctcaat
aacttcaataacatcctaagcagctttgtcactctttttgagctaacagtggtgaacaac
tggtacatcacaatggaaggtttgacatcagaaacttctcactggactcgcctttatttc
atgaccttttacattgtcaccatggtagtcatgacgataatcgtggccttcatactggat
gcatttgtcttcaggatgaactacagtcggaagaacagagagccgctggacgacccagaa
gatgaaaaggggattgtatttgagacagaggtgtctcagactgaagctctacagactctg
gacttgtataaacacacactgggcgtcaccaacctaagctcactgcaggacatgtgtgtg
gctctggagcgtagcgggcactcctcattagtatttcagggtcgaaggtcacgtaccaag
agcgacctcagcatgaagatgtacgaggaggagattcaggaatggtacgaggaatattcc
agaacaaaccttcagcctgatgagacattccacagagaactggacagccctgaagtcaat
gcctcaaacagcattaattag
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