Pimephales promelas (fathead minnow): 120473032
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Entry
120473032 CDS
T08155
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120473032
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120473032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
eIF3_subunit
zf-RING_10
PHP
DUF4200
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120473032
NCBI-ProteinID:
XP_039518572
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAEARISVDQNEFVCPVCLDLLKDPVAIPCGHSYCKICISGCWDQEDEKRVYSCPQCRQT
FSPRPALAKNTMLAEVVEKLKKTKLPADCYAGAGDVECDVCTGRKHKAVKSCLVCQESYC
QTHLDRHEEYHSRKPHKVIDATGRLQDMICRKHDKELEIFCITDQELLCVWCKEYEHKNH
NTESTAAQRTEKQKQLKETQMKIRQRIQQRQKDLHQLREDVESHKRFAHTAVEDSEKIFT
EIIRSIERRRSEATQRIRDQEKTAVSRAEERLERLEQEINDLKKRDAELEQLSHTQDHIQ
FLQSFQSLSAPPESTDELNVSFGSLSSFDGVRESVRQLRDKLEDFWKEEIKKISDGVTFT
NMNPKTRNDFLQYSHQLSPDLNTVNKYISLSERNRVITYTFPELQSYPDHPDRFDQWFQL
LCRESVCGRCYWEIEWSGDVVFISVSYKSISRKGSGYECGFGYNDQSWSLFCSSSSYTFR
HNNIESVLPVKSISGRIGVYVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFAVGYK
SSVKLC
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagaatttcagtggatcagaatgagtttgtgtgtccagtgtgtctggat
ctcctgaaggatccagtggccattccctgcggacacagttactgtaagatctgtatttct
ggctgctgggatcaggaggatgagaagagagtctacagctgccctcagtgcagacagacc
ttcagtccaagacctgctttagctaaaaacaccatgctagctgaagtggtggagaaactg
aagaagactaaacttcctgcggactgttacgctggagctggagacgtggagtgtgacgtc
tgtactggaagaaaacacaaagccgtcaagtcctgtctggtgtgtcaggagtcttactgt
caaactcatttagaccgtcatgaggaatatcactctcgtaaaccacacaaagtgattgat
gccactggacgactgcaggacatgatctgccgcaaacatgataaagagctagaaatattc
tgtatcactgatcaagaattactctgtgtgtggtgtaaggagtatgaacataaaaaccac
aacactgaatcaactgcagcgcagaggacagagaaacagaaacagctgaaggagacgcag
atgaagatccgtcagagaatccagcagagacagaaagatcttcatcagctgagagaggat
gtggagtctcataagcgctttgcacacacagcagtggaggacagtgagaagatcttcact
gagatcattcgctccattgagagaagacgctctgaggcgacacagcggatcagagatcag
gaaaagactgcagtgagtcgagctgaagaacgactggagcgactggagcaggagatcaat
gatctgaagaagagagacgctgagctggagcagctttcacacacacaagatcacatccag
ttcctgcagagtttccagtctctctcagctcctcctgaatctacagacgaactcaacgtt
tccttcggttctctctcctcttttgatggcgtgagagaatctgtccgtcagctgagagac
aaactggaggatttctggaaagaggagatcaagaagatctcagacggagtcacattcacc
aacatgaatcccaagaccaggaacgacttcctacaatattctcatcagctctctccggat
ctgaacacagtgaataaatacatcagtctgtctgagaggaacagagttattacttacact
ttcccagaacttcagtcgtatcctgatcatccagacagatttgatcagtggtttcagttg
ttatgtagagagagtgtgtgtggacgctgttactgggagattgagtggagtggggatgta
gtgttcatatcagtgtcatataagagcatcagcaggaagggatcgggttatgagtgtgga
tttggatataatgatcagtcctggagtttgttctgctcttcctccagttacacattcaga
cacaataacatagagtctgttctccctgtaaagtccatcagcggaagaataggagtgtat
gtggatcacagtgcaggaactctgtccttctacagcgtctctgacacaatgagcctcatc
cacacagtccagaccacattcactcagccgctctatcctgggtttgctgttggttataaa
tcatcagtgaaactgtgttga
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integrated database retrieval system
