Pimephales promelas (fathead minnow): 120474638
Help
Entry
120474638 CDS
T08155
Symbol
rbfox3a
Name
(RefSeq) LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 3
KO
K14946
RNA binding protein fox-1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120474638 (rbfox3a)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120474638 (rbfox3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
120474638
NCBI-ProteinID:
XP_039521050
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MFPSLCCLPISLLPFGFILVLLCVSDSFCVFLFIGQSDSPRSDCPLLPTESDTSVVAVRP
XQAQTQLYMETPSWAETKPGNGLCKTGSIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQE
APAPPEAMAQPYAPAQYPPPPPQNGLPGEYTHPGQDYTGPSPVPEHAAALTIYTPTQTHS
EPPGTDSSTPSLTGTSSIPQVDDVAQTDGSQQLQLQPSDSSEKQQPKRLHVSNIPFRFRD
PDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNN
ATARVMTNKKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGR
AVYNTFRAAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVY
ATADPYHHTIGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttcccctccctctgctgcctccccatttctctcctaccgttcggcttcatcctcgtt
ctcctctgtgtttcagattctttttgtgtttttctgttcatcggacagagtgactcgcca
cgctccgactgcccccttctccccacagaatcggacacctctgtggttgcagtgagaccc
ncacaagctcagacacagctgtacatggagacccctagctgggcagaaacgaaaccagga
aacgggctgtgtaaaacaggaagcattgctctctttggaaacgtagtgtacagtgggctg
ctgaacgatcacttctggcatttcggggtgcccctcgtcacaagactgggtaaccaggag
gccccagctcccccagaagccatggctcagccgtacgccccagcgcagtatcctcctcct
ccacctcagaacgggttgcctggcgaatacacccaccctgggcaggactacacggggccc
agtccggtccctgagcacgctgcagccctcactatctacacacccacacagacacacagc
gaaccacctggcactgacagcagcacgccttcccttacagggactagcagcataccacaa
gtggacgacgtggcacagacagacggctcccagcagcttcagctccagccctcagactct
tcggagaagcagcagcccaaacggttacacgtctccaacattcccttccgcttccgtgac
ccagacctccggcaaatgttcgggcaatttgggaaaattttggatgtggaaattattttt
aacgagcggggctctaagggttttggtttcgtaacttttgaaacaagcgcagacgcagac
cgcgcacgggagaaattaaatggtacaatcgtagagggacgcaaaattgaggtaaataat
gcgacggcaagagtaatgacaaacaaaaaagtggccaacccctatacaaatggctggaag
ctgaatccagtggtgggagctgtctatggtcctgaattttatgcagtgacaggcttcccc
tatccaaccacaggggcgacggtggcttacaggggtgcccacttgagaggcagaggtcgt
gccgtctacaacacgttccgtgctgcacctccaccccctcccattcccgcttatggagct
gtggtttaccaagatggcttctacggtgctgagatctatggtggctatgcagcatacaga
tatgcccaaccagccgcagcagctgcagcagcctacagtgacagctatggcagagtctat
gcaacagcagacccttatcaccacacgattggacctgcagccacgtacagcgtgggcact
atggctagcctttacagaggaggttacagtcgcttcacaccctactag
DBGET
integrated database retrieval system
