Pimephales promelas (fathead minnow): 120479433
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Entry
120479433 CDS
T08155
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120479433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
DL-JAG_EGF-like
EGF_2
DSL
JAG1-like_EGF2
EGF_CA
Neur_chan_memb
MLANA
MFS_2
EphA2_TM
DUF4381
TMEM154
Motif
Other DBs
NCBI-GeneID:
120479433
NCBI-ProteinID:
XP_039527795
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MHNYFGACFSIVLLILTFWTEVCQSSGYLELQLISVENDMGELANGNCCDGARSARDGLC
DLDECDTYLKVCLKEYQVEVTTSGLCTYGTGRSSVVGGNTFQSKGFNGNPNKANDLGTVI
IPFQFAWPLAYTLIVEAWDWDNQTITDGSDDLLIERSINRGKMNPEEDRRIIQHKGQTAS
INYSVCVRCDRYYYGNKCNKQCRPRDDYFGHYTCDHLGGQQCMDGWTGPDCKKAICKQGC
SELHGSCDAPGECVCKYGWQGPLCDECLPYPGCMHGTCLKPWTCTCEKNWGGLLCDKDLN
YCGTHKPCVNGGTCLNAEPDEYFCSCPEGYSGKNCHIAEHACMSNPCANGGTCHELASGF
ECQCPPGWDGPTCAKDKDECTSTPCAHGGTCFDLENGFDCLCPPQWTGKTCQIDVNECTR
KPCLNAYACKNLIGGYHCNCYPGWAGPNCNINVNSCYGQCQNGGTCQDGRHGYVCQCQPG
FMGRHCEVQPSRCASSPCQNDARCRSLAMGYACECLYGYTGTNCEVQVDLCSPNPCQNKA
QCHSLQGDFYCACTDEYEGKTCSQLRDHCKTSTCQVIDSCTIAVTTNGTAKAVRHILSNV
CGPHGRCISQSEGNFTCACQPGFTGTYCHENINDCESSTCHSGGTCIDDIDSFRCICPDG
FEGQLCELEVNECSGEPCLNGGVCKDLLNDFHCRCTDNWKGKTCNSRDNQCDSTTCANGG
TCHDHGDSFRCVCPSGWGGSTCNMAMNSSCESGPCLNGGTCIGGGSVFTCVCKEGWTGPI
CAQDVDDCNPHPCYNGGQCVDGVNWFRCECAPGFAGPDCRINIDECQSSPCSYGATCVDE
INGYRCLCPVGRAGPRCQEFIGVGKACDSSGLQLLHGDRWEDGCNSCQCMNGNIKCTKVR
CGRQPCMLHSDSGELQHPRCPLGQECVAHHFLSCLRPPCSQLGICSTSEPPPISTRCLPN
NGYLDDNCAHVTLVFDSDSVPQGTTAEGVCTELTYLPIIRTLAKDHTLSILCDQSPSSQN
AVEVAMSYEQNSFVAGRAQIQDVVRSIIDVLSKLHNSTLLLAVREVRVDTQDPRPHAGYL
IPLLCVLFVVLWILCVIVCVLWFRRRRKAKQREDTQMEESINNQRGTLLCARTPHKDNTD
PLQENKNLLYPLDRVGDGAEREEEEEEGDDESDRGVVLHKCSSLECSRGDAVYTIHTTAQ
SQPHRTHYSSKDNRCKNNVNESLSEHMKDHYV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgcataactattttggagcttgtttctcaatagtgttgctaattttgacgttttggact
gaggtgtgccagtcgtcgggttatttagagctccagttgatcagcgtggagaatgacatg
ggtgagctcgcgaatggaaactgctgtgacggcgcgcggagcgcacgagacggtctgtgc
gacctggacgaatgtgacacgtacttgaaagtgtgtctaaaggaataccaggtggaggtc
accacatctggcttatgtacgtacggcactggacgctcgagcgtggtcggagggaataca
tttcagtcgaaaggattcaatggaaacccaaacaaggccaatgacctcgggaccgttatc
attccctttcaattcgcttggccgctagcgtacactttgatcgtggaggcttgggactgg
gacaaccaaacgatcactgatggcagtgatgatctgttaatcgagaggagtataaatcgc
ggaaaaatgaaccccgaagaggaccgacggatcattcagcacaagggccaaacagccagc
atcaactacagcgtgtgtgtgcgctgcgatcgctattactacggcaacaagtgtaacaaa
cagtgtcgcccccgagatgattactttggccattacacatgcgatcacttgggcggtcag
cagtgcatggacggctggactgggcccgactgcaagaaagctatctgtaagcaaggctgc
agtgagcttcacggaagctgtgacgctccgggagaatgtgtgtgtaagtacggctggcaa
ggtccactgtgcgatgagtgtttgccgtacccggggtgtatgcatggcacttgtctgaaa
ccctggacatgcacctgtgagaagaactggggaggacttctgtgtgacaaagatttaaat
tactgtggcacacacaagccctgtgtaaatggaggcacttgtctgaatgctgagccagat
gaatatttctgctcttgccctgagggttactccggcaaaaactgccatatcgccgagcat
gcgtgcatgtcaaatccatgtgcaaatggcgggacatgtcatgaactggcatcagggttt
gagtgccagtgtcccccagggtgggatggcccaacttgtgcgaaagacaaagatgagtgt
acgtcaaccccgtgcgctcatggggggacctgctttgatctggagaatggctttgactgt
ttatgccccccacagtggactggcaagacctgtcagatagatgtgaatgagtgtacgagg
aaaccttgtctaaacgcttatgcttgtaaaaatctaattggtggatatcattgcaactgc
tacccgggctgggcgggaccgaactgtaatatcaatgtcaacagctgttacggtcagtgt
cagaatggaggaacctgtcaggatggtcgtcatggttatgtgtgccagtgccagccggga
ttcatgggaagacactgtgaagtgcagccgagcaggtgtgcaagctccccatgccaaaat
gatgcacggtgccgttcgctagccatgggctatgcgtgtgagtgtctgtacggatacact
ggaaccaactgtgaggtgcaggtagatctatgcagtccaaacccgtgtcagaataaagcc
cagtgtcactctctgcagggagatttttactgtgcctgcacagatgaatatgaggggaaa
acatgcagtcagctacgagaccactgcaagaccagcacctgccaagtgattgacagctgt
actattgccgtgacaaccaacggcacagcaaaagcggtacggcacatcttatcaaatgtg
tgtggtcctcatgggcgctgcatcagccagtcagaaggaaacttcacctgtgcctgccaa
ccaggattcactggcacgtactgtcatgagaatataaatgactgtgaatcatccacttgt
cacagcggaggaacatgcattgatgacatcgactccttccgctgtatctgtcctgatggc
tttgaaggtcaactctgtgagctggaggtaaatgagtgtagtggtgagccttgtctaaac
ggaggtgtttgtaaggatctgctgaatgatttccactgtcgctgcactgacaactggaaa
ggaaagacgtgtaactcacgagacaatcagtgtgattccacaacatgtgctaatggagga
acgtgccacgatcatggagactcattccgatgtgtgtgtccttccggttggggtggcagt
acctgtaacatggccatgaacagctcgtgtgaatctggtccgtgtctaaatggcgggact
tgcattggagggggcagcgtcttcacttgcgtctgtaaggaaggatggacggggcctatc
tgtgctcaggatgttgatgactgcaaccctcatccctgttataatgggggacagtgtgta
gacggggtcaactggtttcgttgtgagtgcgcacctggatttgcagggcctgactgtcgc
ataaacatagatgagtgtcagtcctctccctgttcgtatggagccacatgtgtggatgag
attaatggatatcgttgtctgtgcccagtgggacgagctggaccgcgctgccaggagttc
attggtgttggaaaggcatgcgatagctcaggcttgcagcttcttcatggtgatcgttgg
gaggatgggtgcaacagctgtcagtgcatgaatggaaacatcaaatgcactaaagtgcgt
tgtggtcgtcagccctgcatgttgcattcagactctggtgagctacagcacccccggtgt
ccactaggacaggagtgtgtagcgcatcatttcctgtcttgccttcgtccaccctgcagt
cagctgggaatatgctccacctctgaaccaccccccatcagcactcggtgcctacccaac
aacggctacctagatgataactgtgctcatgttacgcttgtatttgactctgacagtgtc
ccgcagggcacaactgctgaaggtgtttgcacagagctaacgtatctgccaatcatacga
accctggccaaagaccacaccctttccattctttgtgaccaatcaccgtccagccagaat
gctgtggaggttgctatgtcatacgagcaaaacagctttgttgcgggacgagctcagata
caggatgttgtccgctccatcattgatgttctgtccaaacttcacaacagcacgttactg
ttggctgtgagagaggtcagagttgacactcaggacccgcgtccccacgctggttacctc
atcccgttgctgtgtgtgttgtttgtggtattatggatcttatgtgtcatcgtgtgcgtg
ttgtggttccggagacgcaggaaagcgaaacaaagagaggacacgcagatggaggaaagc
atcaacaaccagcgcgggacactactgtgcgctcgcacacctcacaaagacaacacggac
ccgctgcaggagaacaagaacctgctttaccctctggatcgggttggagacggagctgag
cgagaggaagaggaggaagagggagatgatgagagcgacagaggggtggttctgcataag
tgctcatctctcgagtgctctagaggggacgcagtgtacactattcacactacagcccaa
agtcagccacacaggacacactacagcagcaaagacaaccgctgcaagaacaatgtgaac
gagagcttaagtgagcacatgaaagatcactatgtatga
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