Pimephales promelas (fathead minnow): 120481165
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Entry
120481165 CDS
T08155
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120481165 (exd2)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
120481165 (exd2)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120481165 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
120481165
NCBI-ProteinID:
XP_039530563
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MMSKQSTWTAAVATMLGATLGGLFLWRSIRTQKKKALNGPSSAEPVQAQLEVEIIPSPES
SAPPQTQKPLRAQTLLEVPPVVVSSLDEWETLWPAFQKDLSICPVLGLDCEWVKSVRVSV
KGKACAVSLLQMATFSGRCMLVRLLTFRNAQIPLPKALVGVLSDPSVLKVGVGCYEDGKR
LTHDHGLTLRCTVDLRYLALRQKQAVLNNGLSLKSLAEDLLNISLDKSLELRCSDWEADV
LTQEQMTYAAHDAQISIALFLHLRGMSKEPRVPAEGESALVPLLACCQGLVDVPFRERHS
AGEGEEGERRRRSRKSTVESPESGDQQVPDPRRNKRKPLGIGYSARKSPLYDNCFLHAPD
GQPLCTCDKKKAKWYLEKGIGELVSEDPFIVRLLFEPSGRPDSQKDYYLTAKENLCVVCG
KAESYIRKNIVPHEYRRHFPAEMKDHNSHDILLLCTSCHAASNVYDGLLKQQLAEDHSAP
QGCEEGIRLLEDSDRRRVRSASRALLSSSNGMPQSRKEELLSVIQSFYCSGQQEVTQEML
QKAAALETRICNESYVPHGLKVVQAYAERGLRGLMELERCWRQHFLTSMKPRHLPPLWSV
NHNHDKYLRKYGEDLQIQLN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaagcagagcacatggactgcagcagtggccactatgttaggagccactctc
ggtggtcttttcctctggcgcagcatccgcactcaaaagaaaaaggccctcaatggcccc
tcttcggctgagcctgtacaagcccagctagaagtggaaatcatcccctcaccagagtcg
tcggcaccaccacaaacccagaagcctctgcgtgcacaaacactgttagaggtgccgccc
gtggtcgtgagttctctagacgagtgggaaacgctttggcctgcgtttcaaaaggacctt
tcgatttgtccggttttgggcttggactgtgaatgggtaaaaagtgtgcgtgtgtcggtc
aaaggcaaggcctgtgcggtgtctttacttcagatggcgacgttttccggccgctgtatg
ctggtcagactgctgacgtttcgtaacgcgcagattcctctaccgaaggctctcgtgggg
gtcctgtctgacccctctgtgctgaaggtcggggtgggatgttatgaggatgggaaacgc
ttgacccatgatcatggtctgactctgagatgcacagtggacctccgttatcttgcactc
agacagaagcaagcggtgctgaataacggcttgagcctgaagtctctggctgaagacctg
ctgaatatctcgctggacaaatctctggagctgcgctgcagtgactgggaggcagatgtg
ttgacccaggagcagatgacctatgcagcacacgatgcccagatctccatagccctgttc
ctccacctgcgggggatgagcaaagagccccgtgtgcccgctgagggtgaatcggcgctc
gtcccgctgctagcctgctgtcagggactggtggatgtgccgtttagggaacgccatagt
gctggagagggggaggaaggggagaggcgacggcggagccgaaagtccacagtggagagt
cctgagtctggagaccagcaagttccagacccacggcgaaacaaacgcaaaccactgggc
attggctactcggccaggaaatcccccctttatgataactgtttccttcatgctcctgat
ggtcagccactctgcacatgtgacaagaagaaagctaaatggtacctggaaaagggtata
ggagaattggtcagtgaagatcccttcatcgtccggctgctgtttgagccgtcagggcgt
cccgactcgcagaaagactattacctcacagccaaagagaatctctgtgtggtgtgcggg
aaagcagagtcttacatcaggaagaacattgtcccacacgagtataggcgccacttcccg
gctgagatgaaggaccacaactcgcacgacatactgctgctgtgcacctcgtgccacgcg
gcctcaaacgtgtacgacgggctcctgaagcagcagctggccgaggatcactccgctccg
cagggctgcgaggagggcattcggctgctcgaggactcggaccggcgcagggtgcgctcg
gcctcacgggctctcctcagctccagcaacggcatgccccagtccagaaaagaggagctc
ctgtcggtcatccagagcttctattgcagcggacagcaggaggtcacgcaagagatgctt
cagaaagctgcagcgttggagaccaggatctgtaacgagagttatgttccacatggactg
aaggtagtgcaggcgtacgccgagcgcggtctgcgtggcctgatggagctggagcgctgc
tggcgccaacactttctgaccagcatgaagccccgccatttgccccctctctggtccgtc
aaccacaaccatgacaaatatctgcgcaagtatggcgaggaccttcaaatccagctcaat
tga
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