Pimephales promelas (fathead minnow): 120482816
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Entry
120482816 CDS
T08155
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120482816 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprm03009
]
120482816 (rexo1)
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
Pre-60S particles
RNases
120482816 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
120482816
NCBI-ProteinID:
XP_039533404
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MLRPTGFFRGIDCPFYCENNKGKAGADGCSRPYCHFRHSKQRRAASGIYDIKKTKALSAS
PNDQGYDPFSPEVVRSGEHNGEPPSSLSAGQDVDLGTMELELVNRAIEAVRNEMEREKKK
LSRIGDQEYEPTTSSVKRPKPPASSHQGYDPGSYQMGQASEYTPSPRSSKYTLDSENSSN
NANALEYVPTAVSKTKVKKLLPPPPSRVKFKYTLDNSKPTTDMEYDPLSNYSAKPTVKEQ
RTLYSKGDGRKRFYPKKQGEDEEYVPTAKKTRSSPPKADVPKYSVSLSESDEESSGTEYR
PMSISRLQRKGINIGLKQERESSLMGQQRKQVAKIDDGFSPSESDDIQDLDRTDKKMHKN
MSVSQVKNVKSDKPKKEEKDPNKKNPKERLESSGVNKTSKNSSKKEKNHSKTLDGSSKSK
EKVRKDGAESKSNDETNKKIVKVKSEHSQREKERGSGDVKKPKTDKPVKNDKVPSKFKDQ
KNGKLESSSKEKCKKKSSHGSGSSNSSSTKDKSKKSSSILDHKEARETKQRNLSHKDLFG
AESAEEDDEEDERIVRKSASAFKRGSLVINKRKTSEDTSSSSEDDNDDGGGGGDEAVDDY
CLQDEMYDSDPMEECLRIFNESKEVKMEDKGRQAKQPSREQEEDEEEEETESTLTTLFPG
QKKRVSHFKVQGKSEASMNAVPMQQRRKTAQEICYQRMQKAQQQAAQLAAAVKTASAPTH
TILGLPGEKRRVAHRPNASLPSSKHGLAGSSSQVLSPTRVTKDLLSVKAQTSAGILSKTT
STTMQKRVAHTPTLKSSTMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKFNSSEQEAFQ
MALEEEKVVYDRSSSKNIYLNVAVNTLKKLRGKSTPMSPVIKTPAVSGNRKAQSHEEVLG
GRLAATTSFTINRSGKQQDMDLKGAILYKILKKYAMTEEQLQEHGYPRPHPEMSGHAVVH
NLPEKKNNDPFSKICCRCGAEYKINANGSCVRKEECCHHWGRLRRNRVPGGWETLYSCCS
GAVGSPGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNAGVYALDCEMCYTKQGLELTR
VTVINSDLKVVYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAKSI
LIGHSLESDLFALKLIHSIVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDSVEGHDS
SEDARACMELMIWKIKEDAKVKR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgttgagacctacggggttctttcgtgggattgactgcccgttttattgtgagaataac
aaagggaaagccggtgcagatgggtgcagcagaccctactgtcacttcagacacagcaaa
caaagacgagctgcctctgggatatacgacatcaaaaagactaaagcgctttccgcgagt
ccaaacgatcaaggatatgatccattcagtccggaggttgtgagatcgggagagcataat
ggggagccaccatcgagcctgtcggcgggtcaggatgtggacctcgggaccatggagttg
gagctggtcaatcgggccattgaggctgttcgcaatgagatggaaagggagaagaagaag
ctttctcggattggagatcaggaatatgaacccaccacgagctctgttaagagaccgaag
ccccctgcatcatcccatcagggctatgatcctgggagctatcagatgggccaagcgagt
gaatataccccgtcccctcgctccagcaaatacactttggactcggagaacagcagtaac
aacgccaacgcgctggagtatgtgcccactgctgtctccaaaacaaaagttaaaaagttg
ttacccccgccaccatcccgtgtcaagtttaaatacactctggataattccaaaccaaca
acggacatggagtatgacccactgtcaaactactcggctaagccgactgttaaagaacag
agaactttgtattcaaaaggagatgggagaaagagattttaccctaaaaaacaaggggaa
gatgaggaatatgttccaacggcaaaaaaaacaaggtcgtccccacctaaggcagatgtc
ccgaagtacagtgtaagtttgtctgaatccgacgaggaaagttcggggacagagtatcgg
ccgatgtccataagccgcctgcagcgcaaggggatcaacatcggcttgaaacaggaacga
gagtcgagtttgatgggacaacaaagaaagcaggtggctaaaatagatgatggcttctca
ccgagtgaatcggatgacatccaggatttggaccggacagacaaaaaaatgcataaaaat
atgtctgtgagtcaggtgaaaaatgttaaatctgataagccaaaaaaagaggagaaagat
cccaataagaagaatccaaaagaaaggctggaaagttcaggtgtgaacaagacgtcaaaa
aattcaagtaaaaaagagaagaaccacagtaagactctggatggaagcagtaagtcaaag
gaaaaggtgcggaaagacggagctgagtcaaagagtaatgatgaaacgaacaagaagata
gttaaggtaaagagtgaacacagccaaagggaaaaggagagaggaagcggcgacgtcaag
aaacccaaaacggacaaacctgtaaaaaacgataaggtgccatccaaattcaaggaccaa
aagaacggaaaacttgagagcagctcaaaggagaagtgcaaaaagaaaagcagccatgga
agtgggagttccaatagcagtagcactaaagataaaagtaaaaaaagcagctcgatcctt
gatcacaaagaggcaagagagaccaaacagaggaatctcagccacaaggacttgttcggt
gctgagagtgccgaagaggatgatgaggaagacgagaggatagtgaggaagtctgcttct
gcttttaaacgggggagcctcgtgattaataagaggaaaacctcggaagatacttcatca
tcgtcagaggatgataatgatgatggtggtggtggtggtgatgaagcagtggacgactac
tgtctgcaggatgagatgtatgactcggaccccatggaggagtgtctgcggatatttaat
gaatccaaagaggtcaagatggaagacaaagggagacaagctaagcagccttcaagggaa
caggaggaggatgaggaggaggaagaaacagaaagcactttaactactctctttcctggt
cagaagaagagggtgtcacattttaaagttcaaggaaagtcagaggcttcgatgaacgct
gtgccgatgcagcagcggaggaagacggcacaggagatctgttaccagcgcatgcagaag
gcccagcagcaggcggcacagctggctgctgctgtaaagactgcgtctgcacccacccac
acaatactggggctccctggagaaaaacgacgggtggcgcaccggccaaatgcctccctg
ccctcctcaaagcatggattagctggttccagcagtcaggtgttgtcacccactagggtg
acgaaagatctgctttcagtcaaagctcaaacgtcggcgggcatcctgtcaaagactaca
tccactacaatgcagaagagagttgctcacacccccactttgaagagctctaccatgaag
cgtcctgtcattcctgctgaatttggggccaaggtgcccactaatgtccgtcaacgttac
ctcaatatcttcattgatgagtgcctgaagttcaattcatctgaacaggaagcctttcag
atggctctggaggaagagaaggtggtgtatgacaggagcagcagtaagaacatctacctg
aatgtagctgtgaacacactgaagaagctccgcggcaagagcacacctatgtcccctgtc
atcaagaccccggctgtatctgggaatagaaaggctcaatcccatgaagaagtacttggt
ggacggcttgctgctacaaccagctttacaatcaaccgctccggcaaacagcaggatatg
gacctcaaaggtgccattctctacaagatactgaaaaagtatgcaatgactgaagaacag
ctgcaggagcatggctaccccagacctcaccccgagatgtctggtcacgctgtcgtccat
aaccttccagaaaagaaaaacaatgaccctttttccaaaatctgttgtcgatgtggcgca
gagtacaagataaatgctaatggcagctgtgtgcgtaaggaggaatgctgtcaccactgg
ggaagattacgcagaaacagagttccaggaggttgggagacactttacagctgctgctct
ggtgcggttggttcccctggatgtgaagtgtgtaaacaacatgtacaagatggccgtaaa
gagtccttagatggttttgtgaagacttttagcaaaccgttgccagtagatggaaatgct
ggtgtctacgccttggactgtgaaatgtgctacacaaagcaaggtttggagctgaccaga
gtgactgtcattaactctgacctcaaagttgtctatgacacgtttgtcaagccagggagc
aaagtggtggattacaacacacggttttcaggtgtgacccaggatgatctggagaacacc
accatcaccctgagagacgtgcaggcggtgctgctgagcatgttcagtgctaagtcgatt
ctaattggacacagtcttgagagtgacctgtttgcgctcaagcttattcacagcattgtc
gtggacaccgccattgtgtttcctcaccgcctgggtctaccctacaaacgtgccctgcga
aaccttatggctgactacctcaaacgcatcatacaggacagtgtggaggggcatgactcc
agtgaggatgcccgggcctgcatggaactcatgatctggaagatcaaagaagatgccaag
gtgaagagatga
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