Pimephales promelas (fathead minnow): 120486035
Help
Entry
120486035 CDS
T08155
Name
(RefSeq) tripartite motif-containing protein 16-like protein isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120486035
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120486035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_6
DUF2180
MRP-S31
TRAF3_RING
RSS_P20
DUF4407
Motif
Other DBs
NCBI-GeneID:
120486035
NCBI-ProteinID:
XP_039537810
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MAEASVLWTREQFICPVCLDLLKDPVTIPCGHNYCKSCIADCWNHQDQKIVHICPQCRQT
FTPRPVLNKNTMLAEVVEKLKKTKLQSEVSVDTVSGEVKCDVCTGRKHEAVKSCLVCLNS
YCQNHLEQHEIFFIGKRHYLMDATGQLQKMICSHHGRLLEVFCRTDQHCICTLCTMDRHK
YHDTVPTEAERTEKERNLKKTQMTYQERIQEREKDIQELREAVACHKHSAQAAVKDIERI
FNELIRSIKKKRSELTRLIRDQEKSAVSQAEGLLQRMEQEIADMRKRRAELEQLSHTDDH
IQFLQEFQYLSVPIEPTERITVTSPLSNDIRQTICQLSEKIENFCKEEIQKISVKHINIV
LRTREDFLQSAHQFTLDPNTANKHIRLSERNRVATYTDTVQWSPDHPYKFDVYYQVMCGE
RVSERCYWELEWNGDVGISVSYKHISRKGTNTKCLFGYNDISWSLFCSPFKYSLRHNDLE
TDIPAASICSRIGVYVDYSAGTLSFYGVSDTMTLICRVQATFTHPLYAGFRLYNGSTVKL
CNLT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtgttttatggactcgcgaacagttcatctgtccagtgtgtctggat
cttctgaaggatccagtgaccattccttgtggacacaattactgtaaatcatgcattgcg
gactgctggaaccatcaggatcagaagatagtccacatctgcccacagtgcagacagacc
ttcactccaagacctgttttaaataaaaacaccatgctggctgaagtggtggagaaactg
aagaagactaaactacaatctgaagtttctgttgacactgtatcaggagaagtaaagtgt
gacgtctgtactggaagaaaacacgaagccgtcaagtcctgtcttgtctgtctgaactct
tactgtcaaaaccaccttgaacagcatgagatttttttcataggtaagagacattatttg
atggatgccactggacaactccagaagatgatctgctcacatcatggcagactgcttgag
gttttctgtcgcactgaccagcactgtatttgtacattgtgtacgatggatagacataaa
tatcatgacactgtaccaacagaagcagagagaacagagaaagagagaaacttgaaaaaa
acacagatgacataccaggagagaatccaggagcgagaaaaagacattcaggagctgaga
gaggctgttgcgtgtcataagcactctgcacaggcagcagtgaaggacatcgagaggatc
tttaatgagctaatccgctctattaagaaaaaacgctctgagttgacaaggctgatcaga
gaccaggaaaagtctgcagttagtcaagctgaaggactcttgcagcgaatggagcaggag
attgctgatatgaggaagagacgtgctgagttagagcaactttcacacacagacgatcac
atccaattccttcaggagtttcagtatctatctgtacctattgaacctacagagagaata
actgtcacttcacctctgtctaatgatataagacaaactatctgtcagctgagcgagaaa
attgagaatttctgtaaagaggagattcaaaagatttctgttaaacacatcaacattgtt
ctaaggaccagagaggacttcctacaaagtgcccatcaattcacacttgatccaaacaca
gcgaataaacacattcgtctgtcagagaggaacagagtggctacttacactgacacagtc
cagtggtcacctgatcatccatacaaatttgatgtttattatcaggtgatgtgtggagag
agagtgtctgaacgttgttactgggagctggagtggaatggtgatgtgggtatatcagta
tcatataagcacatcagccggaagggaacaaatactaagtgtttgtttggatataatgat
atttcctggagtttgttctgctctcccttcaaatactcattaaggcacaatgatttggag
actgacatccctgcagcctccatctgctctagaataggagtgtatgtggattacagtgca
gggactctgtccttctatggcgtctctgacacaatgacccttatctgcagagttcaggcc
acattcactcatcctctctatgctggatttaggctctacaatggatcaacggtaaaactc
tgtaatttaacataa
DBGET
integrated database retrieval system
