Pimephales promelas (fathead minnow): 120488719
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Entry
120488719 CDS
T08155
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120488719 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120488719 (nup133)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120488719 (nup133)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120488719 (nup133)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120488719 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DTP-pb9_A-dom_C
Motif
Other DBs
NCBI-GeneID:
120488719
NCBI-ProteinID:
XP_039541280
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MFTPRGTPSSGRRQAPRTGGRRSVSSVQPGHLFSPRRSAVTARSTPTRVQSHAVVDSCNF
DVQTFGSSLPVKVMEALTMADVDDQISVKVEASGWAWMVCGERLVVWKVSQTSVAKLSVC
KDLQLPPSEFAYSADLISINSSGPLDHATIQSISALAVSPDGSARFWPSLAHEGSYTEIS
LDLGGHLCNYVAAVKGGSFIVSSHRGHLLRLAADSSGKLHHRPVQQGQGMLSGIGRRVSS
LFGIRGQPADLSVFSVLWAKETGSLYSLSSCGLSKWEVDENSETQVLSWSTNQIISDCIT
DAIWDSESNYSEIKKGVNVSYLDMQYSNAGPVVLAAAWHPGDTPCVAYFCLVTLAESVAP
SPDLLTVEVTRYNPPFQSEDELQKTRLVLPEPSSPAAYLYSEELVFACSTGAGRGGLAEE
RISFNSPGDRIRGGGVCAGLPVFFSQNNGLVAILARESASILPETMEDSLCTSVAGPGPE
GTPLETPPKIDMVAQEDKTKLLKQAFLQFCRHDLIGAQSMVDQLFPSDGEGDAELDAIVT
QIDLDLVDDYPACDPRWAESVPDEGAGLTLTSLILLHQLEDKMKAHRCLMDFLLQTGLLD
RLTSTTVRSSPMATRLLLCEHAEKLSAAIVLKNHHAKHPELLNTAILSALKKNNTEIPAN
LTPADVFFREVSQISSIFECLLDEEEKALKEHPDAARWAEVVLNVNDIVKDMLQAAAQYR
ESKASLYRGPENCSPEPEYIPWTASGGVGGVRSVITRQHELILHAAYPHADAELRAVLSE
QLVALLDSLLSGYVAQLTSLRRSGQQERYDALENEYTQKRSELLAPLLELGQNQWVAALA
EKYCDFDILVQLCERTDNQSRLQQYMVKFADQNFADFLFRWYMEKGKRGKLLSQPIATHQ
QLASFLQAHDHLSWLHDIHVQDYQRAHRTLYSQANAETRYFSKKKTLLALSKLTALASDM
PEAVHQRQLTDIVEQERFLLHQETLPKQLLVEKQLNPDSMPLLSPHNLITLYICDENRGA
NEYDFKKALDLLEYLEEKDAVDIDALKREIFSKALMKDWKESWSSSDDNDDPLEAARDST
FIKILQKLIQEGVPLQSYLPEVKDLLQGDELASLKSKPYFQFLLRANYEHYLKAQI
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgttcactccccgcggcacaccgagctcaggccgcagacaggcgcctcgcaccggcggt
cggaggagtgtgagctccgtccagcccgggcatctgttctctccacgccgctccgctgtc
acggccagatccactcccacgcgggttcagagtcatgccgttgttgattcgtgcaatttt
gatgttcagactttcggatcatctctacctgttaaagtcatggaggcgttgaccatggcg
gatgtggacgatcagatctctgtgaaggtggaggcgtccggttgggcgtggatggtttgt
ggagagcgtctggtcgtctggaaagtgtctcagacgtctgtggcaaagctgtcagtgtgt
aaagacctccagctgccgcccagcgagtttgcgtacagcgctgatctcatctccatcaac
tcctctggtccactcgatcatgcaaccatacagtccatcagtgctttggccgtgtctccg
gacggctcggcccggttctggcccagtctggctcacgaggggtcctacactgagatctct
ctggacctgggtggacacttgtgcaactacgtggcggctgtaaagggcggtagtttcatc
gtgtcgtcgcaccgcgggcacctgctccggctcgccgcggactcgtccggtaaactgcac
cacaggccggtccagcaggggcaggggatgctgtcggggatcggccgcagagtctccagc
ctgttcggcatccgcggccagccagccgacctcagcgtgttcagtgtgttgtgggcgaag
gaaaccggcagtctgtactccctcagctcgtgtggtctcagtaaatgggaggtggatgag
aacagcgagacgcaggtgttgagctggagcaccaatcagatcatctcagactgcatcacc
gacgccatctgggactcagaaagcaactattcagagatcaagaagggagtgaatgtgtct
tatctggacatgcagtacagcaacgcggggccggtggtgttggcggcagcgtggcatccg
ggcgacactccttgcgtggcgtatttctgcctggtcactcttgcagagagcgtagcgccc
tccccagacctgctcactgtggaggtcaccagatataacccgcccttccagagtgaggac
gagctgcagaagacgcgtctggtgttgcccgagccgtcgagtcccgcggcgtacctctac
agcgaggagctggtgttcgcttgcagcactggagcgggacgcggaggtcttgcagaggag
aggatctccttcaactctccaggtgatcgtatccgtggcggtggggtgtgtgccggtctc
ccggtgtttttctcccagaacaatgggctggttgccattttagcaagagaaagcgcttca
atcttgcctgagaccatggaggattcgctctgcacttcagtggctggacctggacctgag
ggcactccgttagagacgccacccaaaatagacatggtggcacaggaggacaaaactaaa
ctgctgaaacaagctttccttcagttctgccgtcacgatctgattggtgctcagagcatg
gtggaccagctcttccccagcgatggagagggagatgcagagctagatgccattgtgacc
cagattgatctggatctggtggacgactaccctgcatgtgacccccgctgggccgagtcc
gttcctgacgagggcgctggattaacactgacgtcgctgatcctgctgcatcagttggag
gataagatgaaagctcaccgctgcctcatggacttcctgcttcagacaggtcttctagac
cgcctcacttccacaacagtgcgctcgtccccgatggccacgcgactcttgctatgcgaa
catgcggagaagctgtcggccgccatcgtgctgaagaaccatcatgccaagcatcccgag
ctgttgaacacagccatcctatcagccctgaagaagaacaacaccgaaataccagccaac
ctcacgcccgcggacgtgttcttcagagaggtgtctcagatctcctccatctttgagtgt
ctgttggatgaggaggaaaaagctttgaaagagcatccggatgccgccaggtgggccgag
gtcgttctcaacgtcaatgacatcgtcaaggatatgcttcaagcagcggcacagtaccga
gaatccaaagcatctctgtacagaggaccagagaactgcagccctgagcccgagtacatc
ccatggacagcctcaggaggagtcggtggggttcggagcgtcatcacgcggcagcacgag
ctgatcctgcacgccgcgtaccctcacgctgacgcagagctgcgcgccgtcctgagcgag
cagctggtggcgctgttggactctctgctgagcgggtacgtggctcagctgacgtctctc
cgccgctcgggacagcaggaacgctacgacgcgctggagaacgagtacacgcagaagcgc
tcggagctgctcgcacctctcttggagttgggtcagaatcagtgggtcgcagcgctggcg
gagaaatactgtgactttgacatattggtgcagttgtgcgagcggacggataaccagagt
cggctgcagcagtacatggtcaaattcgctgatcagaacttcgctgacttcctgttccgc
tggtacatggagaaaggcaagagagggaagctgctgtctcagccaatcgcaacacaccaa
cagctggccagtttcctgcaggctcacgatcacctcagctggctgcatgacatacatgtg
caagactatcagagagcccatcgtaccctgtacagtcaggccaacgcagagacgcgatac
ttcagcaagaagaagaccctgctggccctcagcaaactcacggctctcgcgtcagacatg
cctgaagccgttcaccaaagacagctcaccgatatagtggagcaggagcggtttctgctc
catcaggagactcttcctaaacagctgctggtggagaagcagctgaacccagacagcatg
cctctcctgagccctcataacctcatcactctgtacatctgcgacgagaaccgcggcgcc
aacgagtacgactttaagaaagcgctggatctgctggagtacttggaagagaaggatgcg
gtcgatattgacgccctgaaacgagagatcttcagtaaagccttaatgaaagactggaag
gagagttggtcctcttctgatgataatgacgatcctctagaagcagccagagacagcact
ttcatcaagatcctacagaaactcattcaagaaggtgttcctctgcagtcgtacctgcct
gaagtgaaggatctcctgcagggagacgagctggcgagtctgaagtcaaagccctacttt
cagttcctcctgcgggccaattatgagcactacctgaaagctcagatatga
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integrated database retrieval system
