Pimephales promelas (fathead minnow): 120492658
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Entry
120492658 CDS
T08155
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120492658 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120492658 (usp47)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120492658 (usp47)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120492658 (usp47)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120492658 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120492658
NCBI-ProteinID:
XP_039546770
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MEMVPSEEKQLVPKEIESAAEEPRVLCIVQDTTNAKTVNERLTLNLPASTTVNKLYEDVA
HKAGYVNGTFCLAWANAADVAPLDQAGEMSLVLSGFEAGKKNFLQLTDKDGEQPQIASDE
SGTADSSGLDDSSQDRFIGPLPRDGTVGCSSDYSSPSYSYSSILNKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSTAERVLKPKSSLTFELFSVMVHSGSA
AGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
MYRLKDPSRNAKFLEVEDFPEHIKRLVQREKESEEQEKRQREIERNTCKIKLFCMHPVKL
MMMENKLEVHKDKTLREATEMSYKLMDLDGVVPLDCCRLVKYDEFHEYLERSYEGEEDMP
MGLLLGGVKSSYMFDLLLEIRRPDQAFQPYKPGEVMVKVHVVDLKSESIAAPVSVRAYLN
QTITEFKQLIAQATGLCAETMRVVLERCYNDLRLLNVPNKTLKAEGFFRSNKVFVESSDS
TDHQVAFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSLANRTSCPKASADSEDSFDGAKGS
RKSVEAILEESTEKLKNLSLQQQQQQQQSSSTSDSQKSSEHSDFEHIESPAQEPDAVLQP
SQTENSTRVASDTDNQFPSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADSGPLPL
ANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDENGKSKADAQYLYFKTEPYSQ
DDGSGEGQKSLLVHVDKRITLAAFKQNLEPFVGVPSTQFKVFRVYANNQEFESVRLNETL
SSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLLDTVFAKGMTVRQSKEELLP
QLKDQCKLDLSIDRFRLRKKTWKNPGTVFLDYHVYEEDINISSNWEVFLEVLEEPERMKS
MSQLAVLSRRWCPAQMKLEAFREVVLESSSVEELKEKLSEMSGIALENLEFAKGRGTFPC
DISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDSTEDLMDLSEEERNELMKKESS
RLLKTGHRVSYSPRKEKALKIYLDGGPTKDPGQD
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagaaaagcagcttgtgcccaaagagatagaaagtgcagcg
gaggagccgagagtgttgtgtatagtgcaggacaccaccaatgccaagaccgtcaatgag
aggctgacgctcaacctgcccgcctccaccactgtcaacaaattatacgaggatgtggct
cacaaggctggatatgtgaacggcactttctgcctggcgtgggccaacgctgcggatgtg
gctcctctggaccaggccggtgagatgtccctggtgttgtccggttttgaggctgggaag
aagaatttcctgcagctcacagacaaggacggagagcagcctcagatcgcttcggatgaa
tctggcacagcggacagcagtggtcttgatgacagttctcaggatcgcttcattggacct
ttaccccgggacggtactgtgggctgcagcagtgactacagcagccccagttactcgtac
tcctccatactcaacaaatcagagacaggttatgttggtttggtcaaccaagcaatgacc
tgctacctgaacagcctcctgcagaccctgttcatgacccctgagttcaggaatgcactc
tacaattgggagtttgaggagtccgaggaggatccagtcaccagtatcccataccagctc
cagaggctgttcgttctcctgcagacaagtaagaagcgcgccatcgagaccacagacgtg
acccgcagctttggctgggacagcagtgaagcctggcagcagcacgacgtccaggagctt
tgcagagtcatgtttgatgcacttgagcagaagtggaaacagaccgagcaggctgacctg
atcaaccagctttaccagggcaaactgaaggactatgtgcgctgtttggagtgtggctat
gagagctggaggattgacacgtacttggacatccctctggtcatcaggcccttcggggcc
agccaggcttttggcagcgtggaagaagcgctgcaggccttcatccagcctgagactctt
gacgggcccaaccaatacttctgtgagcgctgcaaaaagaaatgtgacgcccgcaagggc
ctgagattcctccatttcccatacctgctgactctgcagctgaaacgcttcgactttgat
tacaccactatgcaccgcattaaactcaatgaccgcatgaccttccccgaggagctggac
atgagccccttcattgacgtcgaggacgagaagtcacctcagacggagagctgcactgac
agtggtgcggagaacgaaggaagctgccacagtgaccagatgagcaacgatttctccacg
gatgatgccgtggacgagggcatctgtctggataacaccagcactgcagagcgggtgctc
aaaccaaagagctctttgacctttgaactcttctcggtcatggtgcattctgggagtgcc
gcaggtgggcactactacgcctgcatcaagtccttcagtgatagccaatggtacagcttc
aatgaccagcacgtcagcaagatcacacaggatgacatccggaagacgtatggcggatcc
tcagggagcaggggctattactccagtgcctttgccagctctacaaatgcatacatgctc
atgtacagactgaaggacccctccagaaatgcaaaattcctggaagtggaggacttccca
gagcacataaagagacttgtgcaacgagagaaagagtccgaggagcaggagaagaggcaa
agagagatcgagcgcaacacatgcaagatcaagcttttctgcatgcatccagtgaagttg
atgatgatggagaataagctggaggttcacaaggacaaaactctcagagaagcaaccgaa
atgtcttacaagctgatggacctggacggagtggtgccactggactgctgtcgattggtc
aaatacgacgagtttcatgaatacctggaacgttcttacgaaggtgaggaagacatgccc
atgggtttgctgctcggcggggtcaagtcttcatacatgtttgacctgctcctggagatc
cgcagacctgaccaagcgttccagccatacaaacctggagaggtgatggtgaaggtccat
gtggtggatctaaagagtgagtctattgctgctccagtcagtgtcagggcttatctcaac
cagaccattactgagtttaagcaactcattgcacaggccacgggtctttgcgcggagacg
atgcgtgtcgtcttagagcgctgctataatgacctccggctccttaacgtgcccaacaag
actctgaaagcagagggtttcttcaggagtaacaaggttttcgtggagagctcagactca
acagatcatcaggtggctttcactgactccgttttgtggaagctgctggatcgccacggg
aacacgatcagactgtttgtctccctgcccgagcaatcgccaggctctttagccaacaga
actagttgccccaaagctagcgcagactctgaggactcttttgatggggcgaagggcagc
agaaagtcagtggaggccattctcgaagagagcactgagaaactgaagaacctttcttta
caacagcaacagcagcagcagcaatcctccagcaccagtgacagtcagaagagctccgaa
cacagcgacttcgagcacatcgagtctccagcacaggagccggacgctgtcttacaaccc
tcccagacggagaactccacgcgggtcgcctcggacacggacaaccagttcccctccgag
gagcgctcggactcggacgtcaacaacgaccgcagcaccagctctgtggacagtgacatc
ctgagctccagccacagcagcgacacgctgtgcaacgcagacagcggcccgctcccgcta
gctaacggcctcgactcgcacagcatcaccagcagccgccgctccaaagcacacgagggg
aagaaggagacgtgggacacggcggaagaagactcgggcacagacagcgagtacgacgag
aacggcaagagcaaagctgacgcccagtacctgtacttcaaaactgagccgtactctcag
gacgacggatctggagaaggacagaaaagtttactcgtccacgttgataagaggatcaca
ctggctgcattcaaacagaatctcgagccgtttgttggcgttccctccactcagtttaag
gtcttccgggtttatgccaacaaccaggagtttgagagcgtgcggctcaatgagacgctc
tcctctttttctgatgacaacaagatcacgattcgattgggacgtgcactgaagaaagga
gagtacagggtgaaggtgtaccagctgctagttaatgacccagagccctgtaagttcctt
ttggatactgtgttcgctaagggaatgactgttcggcagtctaaggaggagttgctgcct
caactcaaagaccagtgcaaactggacctcagtatagaccggtttagactcaggaagaag
acctggaagaacccaggcacggtgtttctggattatcacgtctatgaggaggacatcaac
atctccagtaactgggaggtgttcctggaagtccttgaagagccggagcggatgaagtcc
atgtctcagttagcggttctgtcccgtcgctggtgtcctgcccagatgaagcttgaggcc
tttcgggaggtggtgctggagagcagcagcgtcgaggagctcaaggagaagctcagtgaa
atgagtggaattgctttagaaaacttggagtttgccaagggacgaggaacttttccttgt
gacatttcagtgctggagatccatcaggatttagattggaatcctaaagtctccacgctc
aatgtctggccactctacatctgtgatgatggtgctgtgatcttctacagggacagcacc
gaggatctcatggatctgtctgaagaggagcgcaacgaactgatgaagaaggagagcagt
cgcctgctgaagacgggccaccgggtcagctactccccccgtaaagagaaggccctcaaa
atatacctggacggagggcccaccaaagacccaggacaggactga
DBGET
integrated database retrieval system
