Pseudomonas protegens Cab57: PPC_2138
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Entry
PPC_2138 CDS
T03613
Name
(GenBank) integrase, catalytic domain
KO
K07497
putative transposase
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PPC_2138
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GFIT
Motif
Pfam:
rve
HTH_21
rve_3
rve_2
DDE_Tnp_IS240
HTH_28
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BAO61485
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Position
complement(2349574..2350440)
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AA seq
288 aa
AA seq
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MKFRAIEALAGRYPIAPMCRLLRVSRSSFYAWQQRPPSAREMANLRLSKEIRTIHHEVNG
IYGHRRIKAELAAMGHACGRHRVARLMREAGLRVRSRKRWRLVSSSRHTLPIAPNHLDRQ
FASDRANRHWVSDMTYVRTAQGWLYLAVVLDLYSRAVVGWAMHHRMQQALVHAALEMAIA
RRQPKEEVLLHSDRGSQYCAYDYQALLRRHRIVPSHSRPGNCWDNAAMESFFRSLKAERV
YLTRYASYHEAKTDLFDYIRFYNNRRRHSTLGYLSPMEFERRYASSNS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttccgcgccatcgaggcgttggctggtcgctatcccatagcgccaatgtgccgg
ctgctgcgggtatcccgcagcagcttctatgcctggcagcagcggccaccttcggcgaga
gagatggcgaatctgcgtctgagcaaggagatccgcaccattcaccacgaggtgaatggg
atctatggccatcgccgaatcaaggccgagttggcggccatggggcatgcttgtggtcga
caccgggttgctcgactgatgcgcgaagccggtctgcgcgttcgctcgcgcaagcgctgg
cggctggtttccagcagtcgtcatactctgccgattgccccgaaccacctggatcgccag
ttcgcctcggatcgcgccaatcggcactgggtctcggacatgacctacgtgcggacggcc
caaggttggctgtatctggcagtcgtgctcgatctctattcacgagccgtcgtcggttgg
gcgatgcaccaccgcatgcagcaggccttggtacacgccgcactggagatggccattgca
cgccgacagccgaaagaagaagtgctgctgcactcggatcgaggcagccaatactgcgcg
tacgactaccaggccttacttcgacgacatcgaatcgtgcccagccattcacgtcccggg
aactgctgggacaacgccgcgatggagagcttcttccgttcgctgaaggctgagcgggtg
tacctgacgcgctatgccagctaccacgaggcgaaaaccgacctgttcgactacatccgc
ttttacaataaccgtcgccgccactcgacgctgggctatctcagcccgatggagtttgag
cggcgctatgcgagcagtaactcttaa
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