Pseudomonas protegens Cab57: PPC_3390
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Entry
PPC_3390 CDS
T03613
Name
(GenBank) OprB family carbohydrate-selective porin
KO
K07267
porin
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_3390
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_3390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
BAO62737
LinkDB
All DBs
Position
3783819..3785120
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AA seq
433 aa
AA seq
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MNATYALCPLLAALLLPLDCLAQTPPTPRTGPLSGLGDYLADRGITPHVQFLSLAMKNLD
TGPRPHSFGNSGDLFVGADIDLGTFAGLDGAALHFEQTLFILDHETGVPTSRNWQGAAGS
YFGGAPIHNDLTSNQLSLLTYQQTWLDGRVDLSLGRTNARRYFYIYNCESTVTCNDPIID
SSTGILPPPYGSWGGYLKYQLTPQWYVHGGAFESNPVDYLKERKGLDFSTDDASGNSLLL
GIGSQNRDAYSSHYELNGYYNTSKQVDPLTGAMDFGTGGAFFKFQQALWRADAGTGSAPQ
ALLLFGSLSAAADDKQPFSQFAEAGLTYLAPFDRPQDKLNFKASYLRLNDHQLRFQQQAR
IANGGDPRLGERNVYALEANAHIALTRQLALEPSVQYLVNPDNFYNPEARELSGNGFVVG
LQVTLDVGSLLGL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaacctatgcgctgtgcccgctgctggccgccttgctgctgccccttgattgc
cttgcccagacgccgcccacgccgcgtaccggcccgctgtccggcctgggggactacctg
gccgaccgtggcatcacgccccatgtgcagttcctcagcctggccatgaagaacctggac
acgggcccccggccccacagtttcggcaacagcggcgacctgttcgtcggcgccgatatc
gatctggggaccttcgccggcctcgacggcgcggccctgcacttcgagcagacgctgttc
atcctcgaccacgagaccggcgtgcccacctcgcgcaactggcagggcgccgccggcagc
tacttcggcggcgcgccgatccacaacgacctcaccagcaaccagttgagcctgctgacc
taccagcagacctggctcgacggccgggtcgacctgagcctggggcggaccaacgcccgg
cgctacttctatatctacaactgcgaaagcacggtgacctgcaacgacccgatcatcgac
tcttccaccggcatcctgccgccgccctacggcagttggggcggctacctgaaataccag
ctgacgccccagtggtacgtgcatggcggcgccttcgagtccaacccggtggactacctg
aaggagcgcaagggcctggatttcagtaccgacgacgccagcggcaacagcctgctgctg
ggcatcggcagccagaaccgcgatgcatacagctcccactacgagctcaacggctactac
aacacctccaagcaggtggacccgctgaccggggccatggacttcggcaccggcggtgcc
ttcttcaagttccagcaggcactgtggcgtgccgacgccggtaccggcagcgcgccccag
gccctgctgctgttcggttcgctgtcggcggcggccgacgacaagcagcccttcagccag
ttcgccgaggccgggctgacctacctcgccccctttgatcggccccaggacaagctcaac
ttcaaggccagctacctgcgcctcaacgaccaccagctgcgcttccagcagcaggcccgc
atcgccaacggtggcgacccgcgcctgggcgaacgcaatgtctacgcactggaagccaac
gcccatatcgccctgacccggcaactggccctggagcccagcgtccaatacctggtcaac
ccggacaacttctacaaccccgaagcccgcgagctgagcggcaacggctttgtcgtcggc
ctgcaagtgaccctcgacgtcggctcgctgctggggctctga
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