Pseudomonas protegens Cab57: PPC_5401
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Entry
PPC_5401 CDS
T03613
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_5401
Enzymes [BR:
ppro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PPC_5401
Transfer RNA biogenesis [BR:
ppro03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PPC_5401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAO64748
LinkDB
All DBs
Position
5983317..5984645
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDVARI
TKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIAEIIHLAENGVREVTLLGQNVNGYRGQTHDGRMADLAELIRVVAAIDGIERIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFQQTMKLIEDVGFDFSYSFVYSQRPGTPAADLADETPEAVKKE
RLNALQHRLNQQGFEISRQMVGSTQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVYIDSAQPHSLRGSLLQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtggacctgctgggcgaacatcaggccctggaagtcaccgcacgcgccgaagat
gcggacgtcatcctgctcaacacctgctccattcgcgaacgcgcccaggaccgggtgtac
tcccagctcgggcgctggcgtgagctcaagctggccaatccggacatggtgatcgccgta
ggcggttgcgtggccagccaggagggcgcggccatccgcgaccgcgccccctatgtggac
gtggtcttcggcccgcagaccctgcaccgcctgccggaaatgatcgacgtcgcgcgcatc
accaaattgccgcaggtcgacgtctcgttcccggaaatcgaaaagttcgaccacctgccc
gagccccggatcgatggcccgagcgcctatgtctcggtgatggaaggctgcagcaagtac
tgcaccttctgcgtcgtgccctacacccgcggcgaagaagtcagccggcccttcgacgat
gtgatcgccgagatcatccacctggcggaaaacggcgtccgcgaggtgaccctgctgggc
cagaacgtcaacggctatcgcggccaaacccacgacgggcgcatggccgacctggccgaa
ttgattcgcgtggttgccgcgatcgatggcatcgagcgaatccgctacaccacctcacat
ccgctggagttctccgacagcctgatccaggcgcatgccgaagtaccagaactggtgaag
cacctgcacctgccggtgcaatccggttcggaccggatcctcgcggccatgaagcgcaat
cacaccgccctggagtacaagtccaagctgcgcaagctcagggcggctgttccgggaatc
tgcatcagttcggactttatcgtcggcttcccaggcgagacggagaaggatttccagcag
accatgaaactgatcgaagacgtcggtttcgacttctcctactccttcgtctacagccaa
cggccgggaacaccggccgccgacctggccgacgaaacaccggaggcggtgaaaaaggaa
cggctcaacgccttgcagcaccgcctcaaccagcaaggttttgaaatcagccgacaaatg
gtcggctctacccagcgcatcctggtgaccgactactcgaagaaagacccgggcgaactg
cagggacggaccgagaacaaccgcatcgtcaacttccgctgtgacaatcccacactgatc
ggccagttcgccgacgtgtacatcgactcggcgcagcctcactcgctgcgcggctccctg
ctgcaataa
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