KEGG   Paenibacillus protaetiae: ET464_19005
Entry
ET464_19005       CDS       T06829                                 
Name
(GenBank) DNA polymerase domain-containing protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pprt  Paenibacillus protaetiae
Pathway
pprt03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pprt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    ET464_19005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprt03400]
    ET464_19005
Enzymes [BR:pprt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ET464_19005
DNA repair and recombination proteins [BR:pprt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ET464_19005
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: QAY68152
UniProt: A0A4P6EYH3
LinkDB
Position
complement(4108694..4109602)
AA seq 302 aa
MSAAAKRPTATLAVGGVEIALSNPDKLLWPKEGITKLLYVQKLAALSPYLLRHCANRYLT
TIRYPDGITGKSFYQKSCPQPRPDYVHTMANEGIDYVHLNSLAALMWLGNRASLEFHISF
EQTDNPDYPSEWVLDLDPFRDEEPRIMEAASIVGELLESLHIKSIPKTSGATGVQIIVPL
NRQLTFEQLRAAGQFIGEYLSKAHPRLFTVERFVKNRGDLIYVDYLQHYRGKSIAAPYTP
RAREGAPVSTPLTWDEVRRGCTPKQFHLLNIEQRLLEKGDLLAGSLPPQNVGTIISFINK
RP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgagcgcagcagcaaaacggccaacagcaacgctggctgtcggcggcgtcgaaatcgca
ttatccaaccccgataagctgctttggccgaaagaaggcatcaccaagctgctgtatgtg
caaaagcttgccgccctgtcgccctatttgctccgccactgcgcgaaccgctacttgaca
accatccgttatccggacggcataaccggcaaatcattttaccagaaaagctgcccgcag
ccccggccggactacgttcacactatggccaacgaaggcatcgactatgtgcatttaaat
tcgctggctgcgctgatgtggcttggcaatcgggcttctctggaattccatatttcattc
gagcagaccgacaatccggattatccgtccgagtgggtgctggatctggacccgttcagg
gatgaagaaccccggatcatggaagctgcttccattgtcggcgaactgctggaatctttg
cacatcaaatccattcccaaaacatccggagccaccggcgtgcaaattatcgtgccgctc
aaccggcagctgacgttcgaacagctgcgtgccgccgggcaatttatcggcgaatattta
tccaaagcgcatccgcggctgtttacagtcgaacggtttgtcaaaaaccgcggcgacctg
atctatgtcgattatctccagcattatcgcggcaaatccattgcagctccttatacgccc
cgcgcccgggaaggcgctccagtatctacaccgctgacttgggatgaagtgcgccggggc
tgcacccctaaacaatttcatctgctgaacatcgaacagcgcctgcttgagaaaggcgat
ctgctagccggatcgctgcctccgcaaaatgtagggacgattatcagcttcatcaacaaa
cgcccgtaa

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