Paroceanicella profunda: FDP22_05145
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Entry
FDP22_05145 CDS
T06319
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00521
Streptomycin biosynthesis
ppru00523
Polyketide sugar unit biosynthesis
ppru00541
O-Antigen nucleotide sugar biosynthesis
ppru01100
Metabolic pathways
ppru01110
Biosynthesis of secondary metabolites
ppru01250
Biosynthesis of nucleotide sugars
Module
ppru_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FDP22_05145 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FDP22_05145 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FDP22_05145 (rfbC)
Enzymes [BR:
ppru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FDP22_05145 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDL91217
UniProt:
A0A5B8FGN9
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All DBs
Position
complement(1142849..1143430)
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AA seq
193 aa
AA seq
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MPLNITRHDLQGVLTVTPVRHADARGFFSETWNAAQFAAHGIRTDFVQDNQSLSRDAGVL
RGLHYQAPPAAQAKLVRVLRGAVLDVVVDIRRGSPTFGQHVKVELSAANWAQIYVPEGFA
HGLLSLEPDTEVLYKVSAHYAPAQDAGIAWDDPALGIDWGWPAERLILSEKDRHHPRLAD
ITSPFVFDPEPVG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaacattacccgccacgaccttcaaggagtgctgaccgtcaccccggtgcgg
cacgcggatgcacgcggtttcttttccgagacatggaatgccgcgcagttcgcggcccac
ggcatccgcaccgatttcgtgcaggacaaccagtcgctctcgcgcgatgcgggcgtgctg
cgcgggctgcactatcaggcgccgcctgccgcccaggccaagctggtgcgcgtgctgcgc
ggcgcggtgctggacgtggtggtggacatccggcgcggctcgcccaccttcgggcagcac
gtgaaggtggagctgtccgccgccaactgggcgcagatctacgtgccggagggttttgcc
cacggcctgctctcgctggagccggacaccgaggtgctctacaaggtctccgcccattac
gcccccgcgcaggacgccggcatcgcctgggacgaccccgcgctggggatcgactggggc
tggccggcggagcggctgatcctctccgagaaggaccggcaccacccgcggctcgccgac
atcacctcccccttcgtcttcgatccggagcccgtggggtga
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