Paroceanicella profunda: FDP22_06125
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Entry
FDP22_06125 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_06125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_06125
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FDP22_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDL91397
UniProt:
A0A5B8FGU2
LinkDB
All DBs
Position
complement(1350570..1352471)
Genome browser
AA seq
633 aa
AA seq
DB search
MKRFIGLLFLLGLAMAAPPGQAAPALQETPLFAKDVAAGKLPPVAERVPEDPLVVDLAAR
GRSIGTQGGTLRTFITRPRDVRYMVVWGYARLVAYDDKYDLHPDLLRAVDNEDDRIYTFH
LRRGHRWSDGAPFTTEDFRYFWEDVALNPDLSPGGPPEVMLVDGKPPKVTVIDEVTIRYE
WDTPNPRFLPALAAARPPFIYRPAHYLSQFHAKYVDPATLEPLMAERKARNWAQLHNGLD
NLYNNDNPDEPTLQPWVTVSAMNSQGYELTRNPYYHRIDAEGHQLPYIDHVELTIAAAGL
IPQKVTLGEADLQVRSISFSDAPVLKQGEGRGKYHTWLWSTGYGSDIALYPNQNYNDPAL
RELFRTADFRRALSLGVRRTTINKTLYFGLAKEANVAPLRGSPFYDPALSAAWADHDAER
ANAMLDALGLGKRDGDGTRLLPDGKRLEIVIESAGERPEEADAIELLAEMWAEIGVKVIY
RPLDRDILRNKVYSGQSMMPVWYGWNNGLPTPEAPPVDLAPVEQTNFSWPEWGQYTQSNG
LAGEPPQTDVAKRLLELFHDWERTSQDKRRREIWEEMLRIQADEVFAIGLVSAAPQPAIV
ADTLRNVPEQAIYAWEPGAQLGVLRMDEFWFAP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttcatcggactgctttttctcctcgggctcgccatggccgccccgccgggc
caggccgcgcccgccctgcaggaaaccccgctcttcgcgaaggacgtggccgcgggcaag
ctgccgccggtcgccgagcgcgtgccggaggatccgctggtcgtcgacctcgcggcgcgc
ggccgcagcatcggcacccagggcggcacgctgcgcaccttcatcacccgcccgcgcgac
gtgcgctacatggtggtctggggctatgcccggctggtggcctatgacgacaagtacgac
ctgcaccccgacctgctgcgcgccgtcgacaacgaggacgaccgcatctacaccttccac
ctgcgccgcggccaccgctggtcggacggcgcgcccttcaccaccgaggattttcgctac
ttctgggaggacgtggcgctgaaccccgacctctcgccgggcggcccgccggaggtgatg
ctggttgacggcaagccgccgaaggtgacggtgatcgacgaggtgaccatccgctacgaa
tgggacacgccgaacccgcgcttcctgcccgccctggccgccgcgcgcccgccgttcatc
tatcgcccggcgcattacctcagccagttccacgcgaaatacgtcgacccggcgacgctg
gagccgctgatggccgagcgcaaggcgcgcaactgggcgcagctgcacaacgggctcgac
aatctctacaacaacgacaacccggacgagcccacgctgcagccctgggtcaccgtctcc
gcgatgaacagccagggctacgagctcacccgcaacccctattaccaccgcatcgatgcc
gaggggcaccagctgccctacatcgaccatgtcgagctcaccatcgccgccgccgggctc
atcccccagaaggtgacgctgggcgaggcggacctgcaggtgcgctccatctccttctcc
gatgcgccggtgctcaagcagggcgagggccgcggcaagtaccacacctggctgtggtcc
accggctacggctccgacatcgcgctttacccgaaccagaactacaacgacccggccctg
cgcgagctgttccgcaccgcggatttccgccgggcgctgagcctcggcgtgcgccggacc
acgatcaacaagaccctctacttcggcctggcgaaggaagcgaacgtggcgccgctgcgg
ggctcccccttctatgacccggcgctgagcgccgcctgggccgaccatgacgcggagcgc
gccaacgcgatgctcgacgcgctcggcctagggaagcgcgacggcgacggcacccgcctg
ctgcccgacggcaagcgcctggagatcgtgatcgagagcgccggcgaacgccccgaggaa
gccgatgccatcgagctgctcgcggagatgtgggcggagatcggggtgaaggtgatctac
cgcccgctcgaccgcgacatcctgcgcaacaaggtctactccggccagtcgatgatgccg
gtctggtatggctggaacaacggcctgcccacgccggaggccccgccggtggacctcgcg
ccggtggagcagaccaatttcagctggccggaatgggggcagtacacccagtcgaacggc
ctggccggcgagccgccgcagaccgacgtggccaagcgcctgctcgagctgttccacgac
tgggagcgcacctcgcaggacaagaggcgccgcgagatctgggaggagatgctgcgcatc
caggccgatgaggtgttcgccatcgggctggtcagcgccgcgccgcagccggcgatcgtg
gccgacaccctgcgcaacgtgcccgaacaggcgatctacgcctgggagccgggcgcccag
ctcggcgtgctgcgcatggacgagttctggttcgcgccctga
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