Paroceanicella profunda: FDP22_21620
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Entry
FDP22_21620 CDS
T06319
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppru
Paroceanicella profunda
Pathway
ppru01501
beta-Lactam resistance
ppru01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FDP22_21620
01503 Cationic antimicrobial peptide (CAMP) resistance
FDP22_21620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_21620
01504 Antimicrobial resistance genes [BR:
ppru01504
]
FDP22_21620
Transporters [BR:
ppru02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FDP22_21620
Antimicrobial resistance genes [BR:
ppru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FDP22_21620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
EKR
Motif
Other DBs
NCBI-ProteinID:
QDL94468
UniProt:
A0A5B8FJL9
LinkDB
All DBs
Position
pD4M1B:220996..224163
Genome browser
AA seq
1055 aa
AA seq
DB search
MPRFFIDRPIFAWVVAIFIVLFGLIALPMLPIAQYPNVAPPQVTISTVYPGASAEDLYLT
VTKPIEEELNGIPGLIYYESTSDATGSVSITVTFESGTEIAQAMVDTQNRIGRVEASLPS
VVQQQGVQVEEAGNAFLMVVSLISDDGTQDAVALGDFVQRNIVNEIRRVPGVGRAQVFAS
ERAMRIWLDPDKMVGYDLSTAEVVAAIRAQNAQVAAGSIGAAPNPVSQQTTATVLVTGQL
TTPEEFGAIVLRSNQDGSLVRLRDVATTEVDAQSYAFSSYLDGKPAAAVGVQLSPTGNAL
ATSEAVHDLMKQLEGTFPPGVSYSIPYDTSPFVEESITKVIHTLIEAMVLVFIVMFVFLQ
NFRYTIIPTIVVPIALCGTLAVMLVAGFSINVLTMFAMVLAIGILVDDAILVVENVERIM
SEEGLSPKDATKKAMSQITGAIVGITLVLCAVFVPLAFFPGSVGIIYQQFSLTMVVSILF
SALMALSLTPALCGTILKPVKAGHHHTKGGPAGWFNRNFDRAAHGYSRGVGRMVRRTWRF
MIIYLALLAGMGYLFINLPSAFLPQEDQGFLIASFQGPSDATDNRMRSVTSAAEKIVMQN
DAVDTMITIQGFSFSGAGQNASLAFITLKDWGQRGAGQDAASLGMQFSIAFSQFRDAIAF
ALSPPPIQGLGTTGGFEFRLQQRSGGSSTELAAARDQLMAAASQSPVLAGMRVEGLPDGP
QVLLHIDREKANTFGVTFANINETISTALGSNYVNDFPNNGRMQQVTVQAQDRSRTNVQD
ILNLNVVNQNGASVPISAFADVTWTTGTAQAVGYNGYPAVRISGQAAPGYASGDAIAEME
RLAGELPQGFSFEWTGQSLQEIQSGSQAPALIGLSIFVVFLVLAALYESWAIPLSVMLVV
PLGVIGAVAAVTLRGLSNDVYFTVGIITIIGLSAKNAILIVEFAKELREDGKSLHEATIE
ACRLRFRPILMTSLAFSMGVIPMAIATGASAASQNALGTAVLGGMISATVLAVFLVPVFF
VFVLNNTRADRVLEAHARGKAGAPGSGTQGQGAVE
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtttcttcattgaccggcccatctttgcctgggtcgtcgccatcttcatcgtc
ctgttcggcctgatcgcgcttccgatgctgcccatcgcgcagtatcccaacgtggcgccg
ccgcaggtcaccatttccacggtctatcccggcgcctccgccgaggacctctacctcacg
gtcaccaagcccatcgaggaggagctgaacggcatccccgggctgatctactacgagagc
acctcggacgcgaccggcagcgtctccatcaccgtcaccttcgagagcggcaccgagatc
gcccaggcgatggtcgacacgcagaaccgcatcggccgcgtggaggcctcgctgccctcg
gtggtccagcagcagggcgtgcaggtggaggaggcgggcaacgccttcctcatggtggtc
tcgctcatctccgacgacggcacgcaggacgccgtggcgctcggcgatttcgtgcagcgc
aacatcgtgaacgagatccgccgcgtgcccggcgtgggccgcgcgcaggtcttcgcctcc
gagcgcgccatgcgcatctggctcgacccggacaagatggtgggctacgacctttccacc
gccgaggtggtcgcggccatccgggcgcagaacgcccaggtggcggcagggtccatcggt
gcggcgccgaacccggtctcccagcagaccacggccacggtgctggtcaccggccagctc
accacgccggaggaattcggcgccatcgtgctgcgctcgaaccaggacggcagcctcgtg
cggctgcgcgacgtcgcgaccaccgaggtggacgcgcagagctacgccttctcctcctac
ctcgacggcaagccggccgcggccgtgggcgttcagctctcgcccaccggcaacgcgctc
gccacctccgaggcggtgcatgacctgatgaagcagctcgagggcaccttcccgcccggc
gtgagctactccataccctacgacacctcccccttcgtggaggaatccatcaccaaggtg
atccacacgctgatcgaggccatggtcctcgtgttcatcgtgatgttcgtcttcctgcag
aacttccgctacacgatcatccccaccatcgtggtgccgatcgcgctgtgcggcacgctg
gcggtgatgctggtcgccgggttctcgatcaacgtgctcaccatgttcgccatggtgctg
gccatcggcatcctcgtggacgacgccatcctggtggtggagaacgtcgagcgcatcatg
tccgaggagggcctctcgcccaaggatgccaccaagaaggcgatgagccagatcaccggc
gccatcgtgggcatcacgctggtgctctgcgcggtgttcgtgccgctcgcgttcttcccg
gggtcggtgggcatcatctaccagcagttctcgctgacgatggtggtgtcgatcctgttc
tcggcgctgatggcgctgtcgctcaccccggcgctctgcggcaccatcctcaagccggtg
aaggcggggcatcaccacaccaagggcggcccggcgggctggttcaaccgcaacttcgac
cgcgcggcgcacggctactcgcgcggcgtggggcggatggtcaggcgcacctggcgcttc
atgatcatctatctcgcgctgctggcgggcatgggctacctgttcatcaaccttcccagc
gccttcctgccgcaggaggaccagggcttcctgatcgccagcttccagggcccgtcggat
gccacggacaaccgcatgcgctccgtcacctcggcggcggagaagatcgtgatgcagaat
gacgccgtggatacgatgatcaccatccagggcttctccttctccggtgccggccagaac
gccagcctcgccttcatcaccctgaaggactggggccagcgcggcgcggggcaggacgcg
gcctcgctgggcatgcagttctccatcgccttcagccagttccgcgacgcgatcgccttc
gcgctctcgcctccgccgatccaggggctgggcaccacgggcggcttcgagttccggctg
cagcagcgctcgggcggctcgtccaccgagcttgcggcggcgcgcgaccagctcatggcc
gcggcctcgcagagcccggtgctcgccggaatgcgcgtggagggcctgcccgacggcccc
caggtgctgctgcacatcgaccgcgagaaggccaacaccttcggggtgaccttcgcgaac
atcaacgagacgatctccacggcgctcggctcgaactacgtgaacgacttccccaacaac
ggccgcatgcagcaggtcaccgtgcaggcccaggaccgttcgcgcacgaatgtgcaggac
atcctgaacctcaacgtggtgaaccagaacggcgcctccgtgcccatttccgccttcgcg
gacgtgacatggaccaccggcaccgcccaggcggtgggctacaacggctacccggcggtg
cgcatctccggccaggccgcgccgggctatgcctcgggcgatgcgatcgcggagatggag
cgcctcgccggggagctgccgcagggcttctccttcgagtggaccggccagtcgctgcag
gaaatccagtccggcagccaggcgccggcgctgatcggcctgtcgatcttcgtggtgttc
ctcgtgctcgccgcgctctacgagagctgggccatcccgctttcggtgatgctggtggtg
ccgctgggcgtgatcggggccgtggccgccgtcaccctgcgcgggttgtcgaacgacgtc
tacttcaccgtgggcatcatcaccatcatcggcctctcggcgaagaacgcgatcctgatc
gtggaattcgccaaggagctgcgcgaggacggcaagagcctgcacgaggcgaccatcgag
gcctgccggctgcgcttccggccgatcctgatgacctcgctcgccttctccatgggcgtg
atcccgatggccatcgccaccggcgcctccgcggccagccagaacgccctcggcaccgcg
gtgctgggcgggatgatctcggccacggtgctggcggtgttcctggtgcccgtgttcttc
gtcttcgtgctcaacaacaccagggcggaccgggtgctggaagcgcacgcgcgcggcaag
gccggcgcacccggctccggcacgcaggggcagggagcggtggaatga
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