Paroceanicella profunda: FDP22_24105
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Entry
FDP22_24105 CDS
T06319
Name
(GenBank) GAF domain-containing protein
Organism
ppru
Paroceanicella profunda
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
HisKA_2
Pkinase
GAF
GAF_2
GAF_3
HATPase_c
HATPase_c_2
PK_Tyr_Ser-Thr
HWE_HK
AAA_22
Kinase-like
Motif
Other DBs
NCBI-ProteinID:
QDL94946
UniProt:
A0A5B8G1F4
LinkDB
All DBs
Position
pD4M1F:44793..49892
Genome browser
AA seq
1699 aa
AA seq
DB search
MAERLWPGTHDDTEALTRDSDTELLRAAMPGQGYSVLLRVALSGAGAEALLRQEFALAPR
LDPAWAAQPLDFTRMGARPALRSADPGGRPLGDLLVAPMGMALRLRLGSGMIAAVAAMHV
QGLRHGDIRPANLLCQDSGAVHLLGFGHAGPDIAPARPDVDLAPDSLPWMAPERTGRLHA
PLDRRADLYSLGVVLYELLGGAPPLVARDAAEWLHCHLARSPVDLATRAPELPVGLVRVV
HRLLAKAPEERFADGEAVQAEWERSLPGRQPGPRRAASPDRPRPLVPAQLHGRAGELAAI
SAAFEQAARREGTTVALVHGVSGIGKSALVRAALRGLVPPRGLFAAGKFDQYARGAPYAT
LSQAFGQLITGILGRPRAEREVWADALRRALGPAAAVIAPVAPGLELLLGPLPSAPDLPP
EQATARFDHAFRGLISVFARPEHPLALFLDDLQWIDRSTLDLLRRLLHESGPARLLIVAA
WRSDEVPIDHPLRGLLGLLRVMPGLEIHDVTVGPLDQGAISGLLSEALHMPRGATDGLAA
ALGESSNGNPLHILQLLSALTEERVLRPDPSSGQWHWDEAAVRARPAQVVSELFSFRLTR
LSEAARSLLLRFACLGGAVETATLASAARLDPARTEALLEEALRDGLVQRRAGGWAFLHD
RVQEGAYALAPPRQRAALHLDVGRALAAASGPHPPAERAFAIAAQYTLALPCVTDPADRL
ELARFYLETARHAQASSACRAAQTYASEGLGLLGPMPGDPGLAFDLGFLRAECAFLDGSA
AEALDRLPELAAAARTPTQRGAVAALRITALLALDRSDQAIATCLSYLATQGTMWQPHPS
EATARDEYARFLAALDGRPVAALADLPVMEDEASHAMMDVLAAALAPAFFFDEHLVALML
SRMANLTLDRGICHASPLGFAYLGMICGPGFGDYHQAYEYGRLGVALLDRGLVRFRPRVL
MTFAYHVAPWTRPVRSERALLLRAFEEARESGDITYGGFTSVTLVSSMLWAGERLEQVQR
TAEARLHYVRQVQFGLCADILTSQIQMTRALRGLTRDPGSFAARAFDEAAFEARLTDNPS
LAIAACWHWIRKLQLRVIAGDAAGAVEAALLAEPLLWTTSGHLEMAEYHFHAALAHAGLA
ARSGAELHRARLARHLVQLDRWAEVNPGDFRARASLVHAESARISGFREEAMRLYDRAIM
DARRQDAPQVEALAAERAAQFHASQGLPGLEAACLRDARAAWERWGALGKVWRMDVQRPD
LSPDAAETDSAPVALPGTDIAALQRGSQAVAGPGGFAELAPTLLELVLEHAGASRALLFV
VSGASLRVETEVQARPDGVRTRRIAPGDAPPLPWNLVEACAAEARVIRIDDAHTPGPFAA
DPYWSAATTRALLCLPLLRRGRTVGVILLENDLAAQAFPPARVDLLRLLASQAAEVIEVA
SLEEKDALLKEVHHRVKNNLQLIMSLLSLQAGRIEDPATAMLFADARDRVRSMAFVHESL
YRLGNFASAPMRPQLEAICAQLLRAYAPPDGTVDLRTDLEDLQLDLDRAVPCGLIVNELV
SNALKHAFPDGRRGLVLVMLKRRGAEIAITVRDDGAGLAPEVDIAGAQTLGLQLVCDLTE
QLRGRIEIRRGPGVAAEPAPGGPGEDGQGPRPALPAAGAVPPRPVPRPGAPPLADRLPGV
PLRSGTEITVTFHAGEQMT
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgcctctggcccggtacccatgatgacacggaggccctgacccgcgattcg
gacaccgaactgctccgggccgcgatgcccggtcagggatattcggtgctgctgcgtgtt
gcgctgtccggcgccggggccgaggccctgttacggcaggaattcgctctcgcgccgcgg
ctcgacccggcctgggccgcccagccgctggacttcacccggatgggcgcccgcccggcc
ctgcgcagcgcggatccgggcgggaggccgctgggggacctgctcgtggcgccgatgggc
atggcgctgcgcctgcgcctcggcagcgggatgatcgcggcggtggcggctatgcacgtc
cagggcctgcgccatggcgacatccgtccggccaacctgctgtgccaggacagcggcgcg
gtgcacttgctcggcttcggccacgccgggccggacattgcgccggcgcggccggatgtg
gatctggcgccggacagtctgccctggatggcaccggaacgcaccggccgcctgcatgcg
ccgctggaccggcgggccgatctctattcccttggcgtggtgctctacgagctgctcggc
ggtgcgccgcccttggtcgcgcgcgacgcggcggagtggctgcattgccacctggcgcgt
agcccggtggatctcgccacccgggcgccggagctgcccgtcggcctggtgcgcgtggtg
caccggctgctcgccaaggcgccggaggagcggttcgccgacggggaagcggtgcaggcg
gaatgggagcgcagcctgccggggcggcagcccgggccgcggcgcgccgcctcgcccgac
cggccccggccgctggtgccggcgcaactgcacgggcgggcaggggagctcgccgcgatt
tccgccgccttcgagcaggccgcgcggcgcgaggggaccaccgttgcgctggtgcatggg
gtgtcgggcatcggaaaatcggcgctggtgcgcgcggcgctgcgcggcctggtgccgccg
cgcgggttgttcgcggccggcaagttcgaccagtacgcccgcggcgcgccctatgccacg
ctctcgcaggccttcgggcagctgatcaccgggatcctgggccgcccgcgggcggagcgc
gaggtctgggcggatgccttgcgccgcgctctcgggccggccgcggcggtgatcgctccg
gtcgcgccggggctggagctgctgctcgggccgctcccctccgcgccggaccttccgccg
gaacaggccaccgcgcgcttcgatcatgcgtttcgcgggctgatctcggtcttcgcgcgc
cccgagcatccgctggcgctgttcctcgacgacctgcagtggatcgaccggtccacgctc
gacctgctgcgccgcctgctccacgagtccgggccggcgcggctgctgatcgtcgcggca
tggcgcagcgacgaggtgccgatcgaccacccgctgcgcggcctgctcgggctgctgcgc
gtcatgccgggcctcgagatccatgacgtgaccgtcggtccgctcgaccagggcgcgatc
agcgggctgctctccgaggcgctgcacatgccgcgcggggccacggacggccttgcggcc
gcgctgggggagagcagcaacggcaacccgctgcacatcctgcaattgctctccgccctg
accgaggagcgcgtgttgcgcccggacccgtcgagcggccagtggcactgggatgaggcc
gcggtgcgcgcgcgcccggcgcaggtggtgagcgagctgttctcgttccggctcacccgg
ctgtcggaggcggcgcgcagcctgctgctgcgcttcgcctgtctcggcggcgcggtggaa
accgcgaccctggcctccgccgcccggctggacccggcccgcaccgaggcactgctggag
gaagcgctacgcgacgggctcgtccagcgccgggccggcggctgggccttcctgcatgac
cgggtgcaggagggggcctatgcgctggccccgccgcgacagcgcgccgcgctgcacctg
gacgtgggccgggcgctggccgcggcctccgggccgcatcccccggcggagcgcgccttc
gccatcgccgcgcaatacactctcgccctgccatgcgtgaccgatccggccgaccggctg
gagctggcgcgcttctatctcgagaccgcacgccacgcccaggcgtccagcgcctgccgg
gccgcgcagacctatgcctccgaagggctggggctgctgggcccgatgccaggagacccg
ggcctcgccttcgacctggggttcctgcgcgccgaatgcgccttcctcgacgggtcggcc
gccgaggcgctggaccgcctgccggagctggccgccgcggcgcgcacccccacccagcgc
ggcgcggtggcggcactgcgcatcacggcgctgctggcgctggaccgttccgaccaggcc
atcgccacctgcctcagctatctcgccacccagggcacgatgtggcagccgcacccgtcc
gaggccacggcgcgcgacgaatatgcccgcttcctcgccgcgctggacggccggcccgtg
gccgcgctcgccgatctgccggtgatggaggacgaggcctcgcatgcgatgatggacgtg
ctcgccgccgcgctggcgccggctttcttcttcgacgagcatctcgtggcgctcatgctg
tcgcgcatggccaatctcacgctggaccgcgggatctgccatgcgtcgccgctgggcttt
gcctatctggggatgatctgcggcccgggcttcggcgattaccatcaggcctatgagtat
ggccggctgggcgtggcgctgctcgaccgcgggctggtgcgcttccggccccgggtgctg
atgaccttcgcctatcacgtggcaccctggacgcggcccgtgcgctccgaacgtgccctg
ctgctgcgcgccttcgaggaagcgcgtgagagcggcgacatcacctatggcggcttcacc
tcggttacgctggtgagctcgatgctctgggcgggggagcggctggagcaggtccagcgc
acggcggaggcccggctgcactacgtgcggcaggtgcagttcggcctctgcgccgacatc
ctcaccagccagatccagatgacccgggcgctgcgcggcctcacccgcgaccccgggagc
ttcgccgcccgcgccttcgacgaggcggccttcgaggcccggctcaccgacaatcccagt
ctcgccattgccgcctgctggcactggatccgcaagctgcagcttcgggtgatcgcgggg
gatgcggccggtgccgtggaggccgcgctgctggccgagccgctgctgtggaccacgtcc
ggccacctggaaatggcggagtaccacttccacgccgcgctcgcgcatgccgggctggcg
gcgcgcagcggggcggagctgcaccgggcccggctggcgcgccacctcgtccagctggac
cgctgggcggaggtgaaccccggcgacttccgtgcccgcgccagcctggtccatgccgag
agcgcccggatctccggcttccgcgaggaggcgatgcggctctacgaccgcgcgatcatg
gacgcgcgccggcaggacgcgccccaggtggaggcactggccgccgaacgcgccgcgcag
ttccacgcctcccagggactgccggggctggaggctgcctgcctgcgcgacgcgcgcgcc
gcatgggagcgctggggcgccctcggcaaggtgtggcgcatggacgtgcagcggcccgac
ctcagcccggacgccgcggaaaccgacagcgcgccggtcgccctgccgggcacggacatc
gccgccctgcagcgcggctcgcaggcggtggccgggcccggcggtttcgccgagctggcg
cccacgctgctcgaactggtgctcgaacatgccggcgcctcgcgcgcgctgctgttcgtc
gtctccggcgccagcctgcgcgtggagaccgaggtgcaggccaggcccgacggcgtgcgc
acccggcggatcgcccccggcgacgcgccgccgctgccgtggaacctggtggaggcctgt
gccgcggaggcgagggtgatccgcatcgacgacgcccacacccccgggcccttcgccgcc
gacccctactggagcgcggccacgacccgcgcgctgctgtgcctgccgctgctgcgccgc
gggcgcacggtgggcgtgatcctgctggagaacgacctcgccgcgcaggccttcccgccg
gcccgggtggacctgctgcgcctgctcgcctcgcaggccgcggaggtgatcgaggtggcg
agcctggaggagaaggacgccctgctcaaggaggtccaccaccgggtgaagaacaacctg
cagctcatcatgagcctgctgagcctgcaggccgggcgcatcgaggaccccgcgacggcg
atgctcttcgccgatgcccgggaccgggtgcgctccatggccttcgtgcacgagagcctg
taccggctggggaatttcgccagcgccccgatgcgcccgcaactggaggcgatctgcgcc
cagctcctccgcgcctatgcgccgcccgacggcacggtcgacctgcgcacggacctggag
gacctgcagctcgatctcgaccgcgcggtgccctgcgggctgatcgtgaacgaactggtc
tccaacgcgctgaagcacgccttccccgacgggcggcgcggcctcgtgctggtcatgctg
aagcggcggggcgcggagatcgccatcaccgtgcgcgatgacggcgcggggctggcaccg
gaggtcgacatcgccggggcgcagacgctcgggctgcaactggtctgcgatctcacggag
cagctgcgcggccgcatcgagatccgccgtggccccggggtggcggcggagcccgcaccc
ggcgggcccggggaggacgggcagggcccccgaccggctctgcccgccgccggggccgtc
ccgccccggcccgtgccccgtcctggcgcgcccccccttgcggaccggctcccgggcgtg
ccacttcgcagcggtaccgagattaccgtgacctttcacgccggagagcagatgacatga
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