Pan paniscus (bonobo): 100969148
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Entry
100969148 CDS
T02283
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pps03016
]
100969148
Enzymes [BR:
pps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
100969148
Transfer RNA biogenesis [BR:
pps03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100969148
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
DUF3280
Motif
Other DBs
NCBI-GeneID:
100969148
NCBI-ProteinID:
XP_034820083
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All DBs
Position
7:complement(58842750..59089187)
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AA seq
732 aa
AA seq
DB search
MDPSADTWDLSSPLISLWINRFYIYLGFAVSISLWICVQIVIKTQGKNLQEKSVPKAAQD
LMTNGYVSLQEKDIFVSGVKIFYGSQTGTAKGFATVLAEAVTSLDLPVAIINLKEYDPDD
HLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLG
NSAYASHFNKVGKNVDKWLWMLGAHRVMSRGEGDCDVVKSKHGSIEADFRAWKTKFISQL
QALQKGERKKSCGSHCKKGKCESHQHGSEEREEGSHEQDELHHRDTEEEEPFESSSEEEF
GGEDRQSLNSIVDVEDLGKIMDHVKKEKREKEQQEEKSGLFRNMGRNEDSERRAMITPAL
REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKC
VFCWRHHTNPVGTEWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHC
ALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDS
LKKIDRPLFKDFWQRFLDSLKALAVKQQRTVYRLTLVKAWNVDELQAYAQLVSLGNPDFI
EVKGVTYCGESSASSLTMAHVPWHEEVVQFVRELVDLIPDYEIACEHEHSNCLLIAHRKF
KIGGEWWTWIDYNRFQGLIQEYEDSGGSKTFSAKDYMARTPHWALFGASERGFDPKDTRH
QRKNKSKAISGC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctgcggatacatgggacctctcctcacctttaatatcattatggataaac
aggttttacatttatttgggctttgctgttagcattagcctttggatttgtgtccagatt
gtcatcaagacgcagggcaagaacttacaggaaaaatctgttccaaaagcagctcaggat
ttgatgacaaatggttatgtctcccttcaagagaaagacatctttgtgtctggagtgaag
attttttatggttctcagactggaacagcaaagggattcgcaacagttcttgctgaagca
gttacgtccctggatctgcctgtggccattattaatctaaaagaatatgatccagatgat
catctgatagaagaggtgactagtaaaaatgtttgtgtcttcctggttgcgacatacact
gatggcctaccaactgaaagtgcagagtggttctgcaaatggttagaggaagcatccatt
gattttcgatttggcaaaacttacctgaagggtatgagatatgcggtatttggcctggga
aattctgcctatgctagccacttcaacaaggttggcaaaaatgttgacaagtggctctgg
atgcttggcgcgcatcgtgtgatgagtcgaggggagggcgactgcgacgtggttaaaagc
aagcacggcagcattgaggccgacttcagagcatggaagaccaagttcatctcccagctg
caggcacttcagaaaggggagagaaagaagtcctgtggcagccactgcaagaaaggcaaa
tgtgaatctcaccaacatggctcagaggagagggaggaaggatctcacgagcaggatgaa
ttgcatcatagagacaccgaggaggaagaacccttcgagagctccagtgaagaagagttt
ggtggtgaggaccgtcagagcctaaattccattgttgatgttgaagatttgggcaaaatt
atggatcatgtgaagaaagaaaagagagaaaaggaacagcaggaagagaagtctggtttg
ttcaggaacatggggaggaatgaagatagtgaaagaagagctatgataactcctgctctc
cgagaagcccttactaaacaaggttatcagttgattgggagccactcgggggtgaagctt
tgcaggtggacaaagtccatgctccgagggagaggaggttgttacaaacacacattctat
ggaattgagagccatcgctgcatggaaaccaccccaagcttggcatgtgctaataaatgt
gtcttctgttggcggcaccacaccaaccccgtgggcactgagtggcgatggaagatggac
cagcctgaaatgatcttgaaggaagccattgaaaaccatcagaacatgattaagcagttt
aaaggagtaccgggcgtcaaagcagaacgctttgaagaaggaatgacggtaaagcactgt
gcattgtccctcgtgggagaaccaataatgtacccagagatcaacaggtttttgaagcta
ctccaccagtgtaaaatctccagcttcctggtcacaaatgcacaatttcctgcggaaatc
aggaacctcgagccggttactcagctgtatgtcagtgtggatgccagtaccaaagacagc
ctgaagaaaatcgaccgcccactcttcaaggatttctggcagcgattccttgacagttta
aaagccttggcagtcaagcaacaacgaactgtctacagactgacacttgtgaaagcatgg
aacgtggatgagctccaggcctacgcgcagctcgtgtccctggggaatcctgacttcatc
gaagtgaagggcgttacctactgcggagaaagttcagcaagcagtcttaccatggcccac
gtgccctggcatgaggaagtggtacagtttgtccgcgagttggtggatctgatccccgac
tatgaaattgcatgtgaacacgaacactctaattgcctcctgatagcacacagaaagttt
aaaattggtggtgaatggtggacatggatcgattataaccgcttccaggggctcatccag
gaatatgaagatagtggtggatcaaaaacgttcagcgcaaaggattatatggccagaact
cctcactgggcattatttggtgccagtgaaagaggctttgatcccaaggacacaagacat
cagagaaagaacaaatcaaaggctatttctggatgttga
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