Pan paniscus (bonobo): 100975888
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Entry
100975888 CDS
T02283
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X2
KO
K12878
THO complex subunit 1
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03013
Nucleocytoplasmic transport
pps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100975888 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
100975888 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pps03019
]
100975888 (THOC1)
03041 Spliceosome [BR:
pps03041
]
100975888 (THOC1)
Messenger RNA biogenesis [BR:
pps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100975888 (THOC1)
Spliceosome [BR:
pps03041
]
Complex C
Other components
EJC/TREX
100975888 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100975888 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
100975888
NCBI-ProteinID:
XP_003815687
Ensembl:
ENSPPAG00000031812
LinkDB
All DBs
Position
18:14052858..14102559
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AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPE
DFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaacatcaagccgttgttaagtaccttcagccaggta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtattctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattacttactacgtatgtgc
aatgatctcctaagaagattgtctaaatcccagaatacagtcttctgtggacggattcag
ctctttttggccaggcttttccctctgtctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaatacgaatgagcaggaaagcaccctgggtcag
aagcacactgaagatagagaagaaggaatggatgtagaagaaggcgaaatgggagatgag
gaagctccaacaacgtgctctattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttataaattagatgatactcag
gcctcaagaaaaaagatggaagaattgaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagctgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccaatatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactttggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcgtggaaaaatgaaggttgcccaagttttgtg
aaagaaagaacatcagataccaaacctacgagaataattcggaagagaacagcacccgag
gacttcctaggaaaaggacccagcaaaaaaattctgatgggaaatgaggagttaacaagg
ctttggaatctttgtcctgataatatggaagcctgtaaatcagagacaagggaatacatg
cccactttggaggaattctttgaagaagccattgaacaggcagaccctgaaaatatggtt
gaaaatgaatataaggctgtgaacaattcaaattatggttggagagccctgagactatta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttaccagaa
tatcttgaaaatatggtaataaagctagccaaggaattaccgcctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggagaacaaatagaggtatttgccaacaag
ctgggtgaacaatggaagattctggctccctacttggaaatgaaagactcagaaattagg
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagcttctggttgcctgg
caagatcaagagggagttcatgcaacacctgagaatctgattaatgcactgaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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