Podospora pseudoanserina: QC764_711190
Help
Entry
QC764_711190 CDS
T09816
Name
(RefSeq) uncharacterized protein
KO
K12878
THO complex subunit 1
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03013
Nucleocytoplasmic transport
ppsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC764_711190
09122 Translation
03013 Nucleocytoplasmic transport
QC764_711190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_711190
03041 Spliceosome [BR:
ppsa03041
]
QC764_711190
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
QC764_711190
Spliceosome [BR:
ppsa03041
]
Complex C
Other components
EJC/TREX
QC764_711190
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
QC764_711190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
Thioesterase
Motif
Other DBs
NCBI-GeneID:
87971606
NCBI-ProteinID:
XP_062796778
LinkDB
All DBs
Position
7
Genome browser
AA seq
826 aa
AA seq
DB search
MPATIVDSHGIPAVAKAGEGIRQLLEHAETVKRTSSIEPPLIESHFDDLRGRMNSVYDEE
PMDDSSEAKTARFAIIETAVRDTFKYLVSRASIDSPEFVKVWNLFDILSILSDSELCDPA
LLLWLVEELLDSQTVAGCRKVFDFLESRRERITAKHFKQKQLVILRTCNELLRRLSRALD
PAFSGRVLIFMFQSFPLGDKSSVNLRGEFHIENVTTFDQIPAKTDGDGDKMDVDTDVGTT
GDGSRRGRSNDVDTKKKALDPDALYPIFWGLQEFFNQPKLLFEASHFASFKSGLEATMAT
FLSMKFEQPPRVKERPDRSVEEPKHTLKRKREESNDALSSGFNPKYLTSRDLFKLEISDL
TFRRNILIQALIIMEFLLALSPKAKEKLATVKVPNKSVTYSEKTLSEEDIKWVVETKESI
KSYLKLGPEGPHFCRLVETVLSRDKNWVRWKVENCPPIELPQLSPDVFVEARTNAGKLAT
TKRLRPTPMGSLNLDFLEDDDEERALKKLKDCHRYKVPSLDSYKKGIADDDFEIGMPTNN
ESKTAAIEGKASKAWRALRIASKSKLVLFDKIEDDDKIDVIFEELPAEKDEDDQEITNGE
TAFPEDRRPIVVVDAGKHSRAATGLAKQLYAHHPKTFTKVAVHVTRKPAEGEVNGKDFHF
VDTQAFNMMRDGDQFLEFSEEGDDTHGTSRKVVDAIVDNDRVAVMEMTFEAAQQVKDNGY
DARFIFIQAPAPEVREGQLKENGLSEEQVQQEIKAATEAAEHAKSSPGFYEAVVDAEYQA
LETAIFGVEIGTDSMEAGAPAVTDEGDGKKEEGGGDVAMDDAMPLS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgacaatcgtcgacagccatggcataccggctgtcgccaaagctggcgaagga
attcgccagcttttagaacatgccgaaaccgtcaagcgaacttcgtcaatagaaccacct
cttatcgaatcccactttgatgatcttcgcggtcgaatgaacagcgtatacgatgaggag
cctatggacgattcgagcgaggcgaagacggcgcgtttcgccatcatcgagaccgctgtg
cgcgatacattcaaatatttggtgtcaagagcatcgatcgattcacccgagttcgtcaaa
gtttggaacctctttgacatcctctctatcctctctgacagtgagctttgcgaccctgcc
cttctgctgtggcttgtggaggaattactcgatagccagacagtggccggttgccgtaag
gtctttgacttcctcgagtcgcgccgcgaaaggatcacagcgaagcactttaagcaaaaa
cagctcgtcattcttcgaacctgcaatgagctcttacggcgtctgtccagggctctggac
ccagcattctctggtcgagtcttgatcttcatgttccaaagttttcccttgggggataaa
agctcggtcaacttgcggggagagttccatatcgagaacgtcaccactttcgaccagatc
ccggcaaagaccgacggggatggggacaagatggatgtggacacggatgtcggcacaacc
ggtgacggttcacggagaggcaggtccaacgatgtcgacacgaaaaagaaggcgctggac
ccagatgctctgtatccaattttctgggggttgcaggagtttttcaaccagccaaagctc
cttttcgaggccagtcattttgcctcgttcaaatccgggctcgaggccaccatggctacc
tttttgagcatgaaatttgaacagccaccccgcgtcaaggaaaggccagacaggtcagtc
gaggagccgaaacacaccctcaagcgaaagcgagaagagagcaacgatgctctctctagc
ggcttcaaccccaaataccttaccagcagggatttgttcaagcttgagatcagtgatctg
acattccggcggaatattttgatccaggcactcatcatcatggagtttctgcttgctctt
tcaccaaaagctaaagagaagctggccaccgtaaaggtgccaaacaagtctgtcacttac
tcggaaaagacactgagtgaagaagacatcaaatgggttgtggagacgaaggagtccatc
aaatcatacctcaaactcggcccagaaggaccacacttttgtcgacttgtcgaaacggta
ctttcaagagataagaactgggtgcggtggaaagtcgagaattgtcctccgatcgagctg
ccgcaactgtcgccagacgtgtttgtcgaagccagaaccaacgccggaaaactcgcgact
accaagcggctacgacctacccctatgggctctctcaatctagacttcctcgaggatgat
gacgaggaaagagctctgaagaagctcaaggattgccaccgctacaaagttcctagtctc
gacagctacaaaaaaggaatagccgatgatgacttcgaaatcggaatgccaacaaacaac
gagtccaagacggcagctattgaaggcaaggccagtaaggcttggcgagcgctgagaatt
gcgagcaagagcaagctggttctctttgacaagatcgaagatgacgacaagattgatgtc
atctttgaagagctacctgctgagaaagacgaggatgatcaagaaatcacgaatggcgaa
accgccttccccgaggataggaggccaattgtggttgtggacgctggtaaacattctcgg
gctgctacaggtcttgcaaagcagctctatgcgcatcatccgaaaacgtttaccaaggtg
gccgtccatgtaacacgcaaaccggcagagggcgaagtaaacgggaaggactttcatttt
gttgatactcaggctttcaacatgatgcgggacggagatcagtttctcgagttcagcgag
gagggtgatgacactcacggcacaagtaggaaggtggtggatgccatcgtcgacaacgat
agagttgccgtgatggagatgacttttgaggctgcgcagcaggttaaggacaatggctat
gatgccagattcatcttcatccaagctcccgctcccgaggtgcgggagggccaactcaaa
gagaacggcctgtctgaagaacaagtgcagcaagaaatcaaggcggctacagaggcggca
gaacacgccaagtcgtcgccagggttttacgaagcggtggtagatgcagagtatcaggcc
ttggagacggcgatttttggcgtggagattgggacagatagtatggaggctggggccccg
gccgtgacagacgaaggcgatgggaagaaggaggagggtggtggcgatgttgccatggat
gatgcgatgcccttgtcgtaa
DBGET
integrated database retrieval system