Podospora pseudocomata: QC762_113350
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Entry
QC762_113350 CDS
T09797
Symbol
PRP5
Name
(RefSeq) pre-mRNA processing RNA-helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_113350 (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_113350 (PRP5)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_113350 (PRP5)
Spliceosome [BR:
ppsd03041
]
Complex A
U2 snRNP components
U2 related factors
QC762_113350 (PRP5)
Complex B
QC762_113350 (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
87905660
NCBI-ProteinID:
XP_062748799
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All DBs
Position
1
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AA seq
1201 aa
AA seq
DB search
MARPRDSRSPSPAGSHAARKRKEDDRRDRDRRDGSRDRRRRSRSPDRRYRDRERDRDKDR
DSYRWRDRSLDRRDDDYYRGARRDGVGGGHRDRRRSRDRGPDRVRSPERRRPRSRDGRDS
REGDRDYRSRRDDSRDRRPRRDGSTDRGDGTRPRGQPKPAESAAPIKPSEPAKSTPTPAQ
SEAEKKAERLRKLQAMKEKHAMKEAKEADVSAGSTRKLLAAMDQRAGGTVPSSPAKASPT
PTSPAPTTAAASPALTQAFVSKFDPKAIARNARGNRASSPTKLGDVKLGDVKLSNQGGSA
IVAKKEGGLLPTNRTLSTFGFQKAADNQKSTSKRKLDMDDEEIIKRKLVKLPDFALENAD
TTPYVDADADDDVEDDLDLVLGRNEEEMAEAQRILQERRDERIQKEGMAMEVDSEILAAE
KEDPTPADNAMDVDEEIDPLDAFMADLEQKVPNSGISSKPNGNQANGKKAFEPEAYYSDD
NYGYEADKADPSSILAMAAKKKKKDIPVIDYSKLELNKIRKNFWVEPLELSQMTEEEANE
LRLELDGIKVSGKNIPRPVQKWSQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRDV
IGVAKTGSGKTMAFALPMLRHIKDQDPVSGDDGPIALIMTPTRELCTQIYTDLLPFTKVL
KLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEAD
RMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKKVLRDPVEITVGGRSVVAPE
ITQVVEIIDESKKFVRLLELLGELYADDDDVRALIFVERQEKADDLLRELLRRGYGCMSI
HGGKDQEDRNSTISDFKKGVCPILIATSVAARGLDVKQLKLVINYDVPNHLEDYVHRAGR
TGRAGNTGTAVTFITEEQENCAPGVAKALEQSGQPVPERLNEMRKSWKEKVKAGKAKDAS
GFGGKGLERLDKEREAARLRERKTHKAEGEEEEDKGDDKDEETKKDKAKEAIQAAVSAIV
SRDASKTEAAEGKASGGLEHGVIKSSGVIAGSSSAGAGKGGGALDKAASAISEINARLAR
AGQLRPGQPIDNKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGTY
YPPGKEPGPGQEAKLYILIEGDTEVVVGNALSELTRLLREGTIAAADAESRAPASGRYTI
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcccagagactcgcgctcaccatctcctgcaggaagtcatgctgcgcgaaag
cggaaagaggatgatcgacgcgaccgcgaccgccgtgatggctcgcgtgatcgccgccgc
cgctcccgtagcccagatcgccgataccgtgaccgcgagcgggaccgagataaagatcgc
gactcgtatcgctggagagaccgctccctagaccgccgagatgacgattattaccgaggt
gcacgtcgggatggtgtgggtggtggccaccgtgataggagacggtcacgcgacagagga
cctgatagggtgcgctccccagaacgtcgaagacctcgcagcagggatggtagggatagt
agagaaggggacagagactaccgttctaggagggatgactcccgcgaccgcaggccccgc
cgggatggctcaacagaccggggggatggcactcgaccccggggtcaacccaagccagca
gagagtgctgcaccaatcaagcccagcgagccagctaagtctacaccaaccccagctcag
tcggaagctgaaaagaaggctgaacggttgcgcaaacttcaagccatgaaggagaagcac
gccatgaaggaagctaaggaggccgatgtttcagccgggagcaccaggaaactactcgca
gctatggaccagagagccggcggcaccgtccccagcagccctgcgaaggcctcgcccact
cccaccagccctgcccccaccactgcagctgcatctccggcgttaactcaggcttttgtc
agcaaattcgaccccaaggccattgccaggaacgccaggggcaaccgcgccagctcacca
accaagctgggcgatgtcaaacttggtgatgtaaaactgagcaaccagggagggtcggcc
atagtagccaaaaaggaaggcgggcttcttcccaccaacagaacactgagtacgttcgga
tttcagaaggctgctgacaaccagaagtcaacctcaaagcgcaagctcgacatggacgat
gaggagattatcaagcgcaaacttgtcaagctcccggacttcgctttagaaaatgctgac
actacaccatatgtcgatgctgatgccgatgacgatgtcgaggacgacttggatcttgtc
ttgggtcgcaacgaggaggaaatggccgaagcacagcgaatcctccaagaacggcgcgat
gaacgcatccagaaagagggcatggctatggaggtagactccgagatcctcgctgccgag
aaggaagacccaacaccagctgacaacgccatggatgttgacgaagagattgatcccctg
gatgcctttatggctgatctggaacagaaagttccaaacagcggcatatcgtcaaaacca
aatggcaaccaagcgaacggcaagaaggcgtttgagcctgaggcgtactacagtgatgac
aattacggttacgaggcagacaaggccgacccgtcatctattctcgccatggctgccaag
aaaaagaagaaggacattcccgtcattgactatagcaagcttgagctcaacaaaatccgg
aagaacttttgggttgagccgctcgagctcagtcaaatgacagaggaagaagcaaacgag
cttagattggagttggacggcatcaaagtctctggcaagaatatcccgagacctgtgcaa
aagtggtctcagtgtggcctaacgcgacccatcctggacaccatcgaaggcctcggctat
gagaagcctacaccaatccagatgcaagccttgcccgtcatcatgtctggccgagatgta
atcggtgtggcaaagacgggctcaggcaagactatggcgtttgcgctcccaatgcttcgt
cacatcaaggatcaagacccagtgagcggcgacgatggcccaatcgccctgatcatgaca
cccacaagagaactgtgcacccaaatttacaccgacctgctgccgtttaccaaggttttg
aagcttcgtgcagttgctgcctatggtggcaatgctatcaaggaccagatcgccgagctc
aagcgtggcgccgagatcattgtcgctacacccggacgtatgattgatctcctggccgcc
aattctggacgtgtaaccaacctgaagcgtgccacgtatttagtgctggacgaagcagat
cgcatgtttgacatgggctttgagccgcaggtcatgaagattttcaataatgtcaggccg
gataggcagaccatcttgttttcagccaccatgcctcgcatcattgacgctctgacgaaa
aaggttcttcgggacccggtagaaatcacggtgggaggacgcagtgtcgtggcgcccgag
atcactcaggtcgtggagatcattgacgagtccaagaagtttgtccgcctattggagctt
ctcggagagctgtatgccgacgatgatgacgttcgcgccctgatctttgtggagcgtcaa
gagaaggcggacgatctgttgcgagagctcctgcgccgcggttacggctgcatgtccatc
cacggcggcaaagatcaggaagatcgcaactctaccatctctgatttcaagaagggtgtc
tgccctatcctcatcgccacctcagttgcggcccgtggtctggatgtgaagcagctgaag
ctggtcatcaactacgatgtccccaaccatttggaagattatgtccaccgtgccggccga
actggtcgggcaggcaacaccggtacagctgtcacttttatcaccgaagagcaagagaac
tgtgctcctggtgtggccaaggctctcgagcagagtgggcagcctgtcccggaacggctc
aatgagatgcgcaagtcctggaaagagaaagtcaaggctggcaaagccaaagacgccagt
ggatttggtggcaaaggtttggagaggctggacaaggagcgtgaagctgctcgtcttcgc
gagcgcaaaacccacaaagccgaaggcgaggaggaagaagacaagggagatgacaaggac
gaagagaccaagaaggacaaggcgaaggaagccatccaggctgctgtcagcgccattgtt
tctcgggatgcctccaagacggaggcggcggagggcaaggctagcggtgggcttgagcac
ggtgtcatcaagagcagcggcgtcattgctggcagcagcagtgctggcgcgggcaagggt
gggggtgctttggataaggctgcctcggccatcagcgaaatcaacgcccggttggcgaga
gctggccagcttagaccaggccagccgattgacaataagggtccggatgcgggtgctttt
catgccacattggagatcaacgacttccctcaaaaggccaggtgggcagtcaccaaccgc
acgaacgtggccaaaatcttggaggctactgggacgtcgatcaccacaaagggtacttac
tatcctcccgggaaggagcccgggccgggccaggaggcgaagttgtatattcttattgag
ggtgataccgaggtggtggtgggcaacgcgctttcggagcttactcggttgttgagggag
ggcacgattgcggcggcggatgcggagagcagggcgcctgctagtgggaggtataccatc
acataa
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