KEGG   Podospora pseudocomata: QC762_604820
Entry
QC762_604820      CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03013  Nucleocytoplasmic transport
ppsd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    QC762_604820
   03015 mRNA surveillance pathway
    QC762_604820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_604820
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     QC762_604820
   mRNA cycle factors
    P-body specific factors
     QC762_604820
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 87912086
NCBI-ProteinID: XP_062740257
LinkDB
Position
6:complement(665796..668326)
AA seq 690 aa
MSTPQLLSRKANGTTAVAQSSANSPKATKTKAPANGEKVVIRRLPPGLTEAEFHAILGDE
WKLGDGKVDWYKWYPGKVSQHPSKPSTPARAYLHVSQRDQLPELLRKVQEAKWEDAKETY
NDPALVAPPTVEFSVYKKIPSEKKRVDGRQGTIDQDPEFMAFLESLASPDGNKEGVTAEP
EPEEEPEKTTTTPLIEYLKERKAAKAKEIAAAKIAMKHARTESLTGKGKAPATSAEEPKR
RSTRDRESRTERERATEKAPERPRESVKILTKKAVAAAEAAAEAAKVAAIQKSTQSSAPS
ASSEAPSKSRRAGIAAAARILQRDLGLSSSNAHRKARMDAAKADADSKGSAAKGPAKENV
PIAPEPAPPAPPAQPSSSAPPKSQQQQQQQQQQQQQQQQQQQPAASSNRSRNRRRGGADE
GGKSKGDNKADKQADTTPPAPAPAPAKPVLLLKKRETPQAQRQQPSAPATPVSAMASQST
PTTAAPSQPAAPKNAPAKQGGGGRESKKNAGPAPSSGATRAFIKHANHSQGVTEALLKDA
LSAYGTVTSVDIDRKKGFAYVDFTDHAGLAKAMAASPVTIAQATVQVLERKDMTAKKGGQ
SSGSTQGKNAAASASATTASTPTPAPAPAAASNSTAPEKPAGEQQPKESRRNPRRSKRGG
RDNKDKDGKEGGGKGGGGGGSAPAAAAASC
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgtcaactccacagttgttatcacgaaaggcaaacggcactacagcagtcgcccagtct
tcagccaattccccaaaagcaaccaagaccaaggcacccgccaatggagaaaaagtcgtg
atccgtcgcctaccaccaggtcttaccgaagcagagttccatgccattttgggcgatgaa
tggaaactcggagatggcaaggtcgactggtacaagtggtatcctggtaaggtctcgcaa
cacccttcaaaaccgtcgacaccagctcgggcatatctccatgtctcgcagagagatcag
ttgccagaactcctccgcaaggtacaagaggccaagtgggaagatgcgaaggagacctac
aacgatccagcccttgtcgctccaccaaccgtcgagttctccgtctacaagaagattccc
agcgagaagaagcgtgtggacggccgacaagggaccatcgatcaagacccggagttcatg
gcttttctggagagccttgcaagcccagacgggaacaaagagggtgtcactgctgaaccg
gagcccgaagaggaacccgaaaagaccaccacgacacctctgattgagtatctgaaggag
aggaaggctgccaaggcaaaggaaatcgctgctgctaagatcgcaatgaaacatgccaga
acggagtcactgactgggaagggcaaggcaccagctaccagtgctgaggaacccaagagg
agaagcacccgggacagagagtcgagaaccgaaagggagagggccaccgaaaaggcaccc
gagaggcccagggagtcggtcaagatcttgaccaagaaggctgttgccgctgcagaggct
gccgcggaggctgctaaggtggcagccatccaaaagtcaactcagtccagcgcaccatcc
gcgtcttcggaggctccatcgaagagccgtagggcaggcattgctgctgctgcgcgtatc
ctacagcgtgacctgggtctgagctctagcaacgctcaccgcaaggccagaatggatgca
gccaaagcggatgccgatagcaagggcagtgctgcgaagggaccagcgaaggaaaatgtc
ccaatcgctcctgagccagcaccacccgcccctcctgctcagccgtcgtcatctgctcca
cccaagtcgcaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcaa
cagcaaccagcagcttcttccaataggtctcgcaacagaagacggggcggcgccgatgag
ggtggaaagtcaaagggggataataaagccgacaagcaggccgacacaacgcctccggca
ccagcacctgcaccagccaagcctgtgcttcttctcaagaaaagagagacaccacaggcc
cagcgtcagcagccatcagcacctgccactcctgtttcggctatggcatcacagtctaca
ccgacgacagctgcaccctcccaacctgctgcaccgaaaaatgcaccagcaaagcaaggc
ggtggcggccgagaatccaagaagaacgccggacctgcccccagttcaggcgcgacacga
gctttcattaagcatgcaaaccactcacagggtgtcaccgaggcgctgctcaaggatgcc
ttgtcggcgtatggcactgttacttcagtggatattgatcgcaaaaaggggttcgcgtat
gtcgatttcacagaccatgctgggctcgccaaagctatggccgccagcccggtcacgatt
gcgcaggctacagtgcaggtgctggagaggaaggatatgacggctaagaagggggggcag
tcgtcgggttctacccaggggaagaatgccgctgcctctgcttctgctactactgcgtct
acgccaaccccagctcctgcgccggcagctgcgtcgaacagtaccgcgccggagaagcct
gctggggagcagcaaccgaaggagagcaggcgtaacccgcgtcggagcaagcgtggtggt
cgggataacaaggataaggatgggaaggagggtggtggaaagggtggtggtggaggcggc
tctgcacctgctgccgctgctgcttcttgttaa

DBGET integrated database retrieval system