Pseudomonas pseudoalcaligenes: BN5_1810
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Entry
BN5_1810 CDS
T03772
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppse03016
]
BN5_1810 (ybbB)
Enzymes [BR:
ppse01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
BN5_1810 (ybbB)
Transfer RNA biogenesis [BR:
ppse03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BN5_1810 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
AAA_18
AAA_22
Rhodanese
AAA_7
RsgA_GTPase
SLFN-g3_helicase
Zeta_toxin
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDM40386
UniProt:
W6R1X0
LinkDB
All DBs
Position
1922149..1923249
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AA seq
366 aa
AA seq
DB search
MRDNCTDYRDLFLHDRAMMDTRAPVEFHKGAFPGVINLPLMTDIERQRVGTCYKQQGQQA
AIELGHQLVSGQTKAERIEAWAAFAKANPDGYLYCFRGGLRSQIVQQWLKSEAGIDYPRV
VGGYKAMRTFLLQATDEAVQACDFVLVGGMTGTGKTEVISQLSNSLDLEAHANHRGSSFG
KRATGQPEQIDFENALAIDLLKRRAAGQQQFVLEDEARLIGRCSLPLPLYQAMQHHPLVW
LEDSVANRVERILQAYVVELCAEFVAVQGAEAGFTAFAARLRESLANITRRLGGERYQRL
AAIMDQALEEQARDGQVDTHRGWIEALLVEYYDPMYVFQRESKSGRIEFAGEQQAVVEYL
RKRNGG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacaactgcaccgactaccgcgatctgttcctgcatgaccgggcgatgatggat
acccgtgcaccggtcgaattccacaaaggcgcgttccccggcgtgatcaatctgccgctg
atgaccgacatcgagcggcaaagggtcggcacctgctacaagcagcaaggccagcaggcg
gccatcgagctgggccatcaactggtcagcggccagaccaaggccgagcgcatcgaggct
tgggccgcctttgccaaggccaaccctgacggttacctgtactgctttcgcggtggcctg
cgctcgcagatcgtccagcaatggctgaaaagcgaggcgggcatcgactatccgcgcgtg
gtcggtggttacaaggccatgcgcaccttccttctgcaggccaccgacgaggcggtacag
gcgtgcgatttcgtgctggtgggcgggatgaccggcaccggcaagaccgaggtgatcagc
cagctgagcaacagcctggacctggaggcgcacgccaatcaccgaggctccagctttggc
aagcgcgccactggccagcccgagcagatcgatttcgaaaatgctctggccatcgatctg
ctcaagcgccgtgccgcgggacagcagcagttcgtgctggaagatgaggcgcgtctgatc
ggccgctgctccttgccattaccgctgtatcaggcgatgcagcatcatcccctggtgtgg
ctggaggacagcgtggccaaccgtgtggagcggattctgcaggcctacgtggtcgagttg
tgtgccgagttcgttgcagtccagggtgccgaggcaggcttcaccgcgttcgccgcgcgc
ctgcgcgagagcctggccaatatcacccgtcgcctgggcggcgagcgttatcagcgcctg
gcggcgatcatggaccaggcgctggaggagcaggcgcgcgacggccaggtcgatacccat
cgcggctggatcgaggccttgctggtcgagtactacgatcctatgtacgtgttccagcgc
gagagcaaatccgggcggattgaattcgccggggagcagcaggctgtggtggaatacctg
cgtaagcgaaacggcgggtga
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