Pseudomonas psychrophila: G5J76_15255
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Entry
G5J76_15255 CDS
T06988
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsh03000
]
G5J76_15255
Transcription factors [BR:
ppsh03000
]
Prokaryotic type
Helix-turn-helix
Other families
G5J76_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
PAS
AAA_2
HTH_23
HTH_7
PAS_8
PAS_4
HTH_17
HTH_22
RWP-RK
Mg_chelatase
HTH_50
HTH_28
HTH_30
AAA
IclR
HTH_AraC
AAA_16
Sigma70_r4_2
HTH_38
Mga
DUF1492
PAS_7
AAA_7
TrmB
Motif
Other DBs
NCBI-ProteinID:
QIE33532
LinkDB
All DBs
Position
3408511..3410406
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AA seq
631 aa
AA seq
DB search
MKPALINDHAQHVLQAVQGTHTSHDPVNDLAITRSWRRCLDQYQLDPASRRAPNVVEHPR
LQDHRAPLEHIIGVAHWQMTHLHQQLGRDGHVVLLTDARGVAIDSVFNESERAEFQRAGL
WLGSVWSEDCEGTNGVGTCLVEQQQVTIRRDEHFRSKHVGLSCSASPIFDASGALLAVLN
LSSVRDTHSQQQYFKAMALTQLSANLIESCFFLGHDPQRYLLRFHPEAGFVGLLGEGLLS
FDEGAHICSVNRAALELLGLSRDQVVGQSLTMLLQTPIDHLMSQASSQPSVCWPLRLADG
RLLYGQLREPVRPVPLGTPASPTINDVHVCLEDPRLQRGIARALRVMEHDVPVFLQGETG
TGKEAFAAALHRASSRRRQPFVAINCAAIPETLIESELFGYRGGSFTGARKDGMIGKLEQ
AHGGILFLDEIADMPLALQTRLLRVIEERQVVPLGGATARALDVRIISASHQDLQVCVAQ
GRFREDLFYRIAGFTVQLPPLRERSDKGSLLDLLVLEETKGTGIRLEAGVRECLLSHPWP
GNVRQLRTCLRTLVALSLDGMVTLEDLAELLPSVPATVALAEDPLGESERQTLLTLIEAE
HWHIAHVAARLGISRNTLYRKLRQHGISRPG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggccttgatcaacgaccatgcacaacacgtgctgcaagccgtccagggcact
cacaccagccatgaccctgttaatgaccttgccatcacacgatcctggcgccggtgcctg
gatcagtatcagctcgatcctgccagtcgccgcgcacctaacgtggttgaacatccgcgc
ttgcaggatcatcgcgcaccccttgaacacatcatcggtgtagcgcactggcagatgacc
cacttgcaccagcagctcggacgcgatggccacgtggtgctactcaccgatgctcgcggt
gtggcaatcgacagtgtgttcaacgaatccgaacgagccgaatttcaacgcgcagggctg
tggctcggctcggtctggagtgaagattgcgaaggcaccaacggtgtgggcacctgcttg
gtcgagcaacaacaggtcaccatccgtcgtgatgagcattttcgtagcaagcacgtcggt
ctgagctgttcggcaagcccgatatttgatgccagtggagcgttgctggcggtgctcaat
ctttcgtctgtacgggatactcacagccagcagcaatatttcaaagccatggctttgact
caattgtcagccaatctgatcgaaagctgttttttcctggggcatgatcctcaacgctat
ttgctgcgcttccacccagaggcaggcttcgtagggctgctgggtgaaggcctgctcagt
ttcgatgaaggtgcgcatatttgctcagtcaatcgtgctgcgctggagctactgggcctg
agtcgtgaccaggtggttgggcagtctctgactatgctgctgcaaacacctatcgatcat
ctgatgagtcaggccagttctcagccgagtgtgtgctggccgctgcggctggcggacgga
cgtctgctctacggacagttacgagaacctgtacgcccggtgcctttaggcacgcctgca
tccccaacaatcaatgacgtgcatgtgtgcctcgaagacccgcgcctgcaacgcggcatt
gcccgcgcactgcgtgtcatggagcacgatgtgccggtgttcttacagggtgaaaccggt
actggcaaagaagcgtttgctgcggcgttgcatcgtgcgagctccagaaggcgccaaccg
tttgtagcgatcaattgcgcggccatacccgaaacgctgatcgagagcgagctgttcggc
tatcgcggcggaagcttcaccggagcacgcaaggacgggatgatcggcaagctggagcag
gcccatggcggcattctgtttctcgatgagatcgcggatatgccactggcgttacagact
cgcctgctgcgagtgattgaggagcgccaggtggtgccgctgggtggcgcgacggcacgt
gcgctcgacgtacgcattatcagtgccagccaccaggatttgcaggtctgtgtggcgcaa
gggcgctttcgcgaagatcttttttatcgcattgccggattcaccgtgcagctcccgccg
ctgcgcgaacgatccgacaagggcagcttgctggatcttctggtgctcgaagagacaaaa
ggcacagggattcggctggaggcgggcgtcagagagtgcttgctgagccacccttggcca
ggcaatgtccgccagctgcgtacgtgtctgcgcacgctggtagcgttgtcgctggacggg
atggtcacactggaggacttggcggagttgctgccgtcagtgcctgcgacagtcgcgttg
gccgaagatcccctgggagaatccgaacgccagacgctgctcacgttgattgaggcagag
cactggcatatcgcccatgttgccgctcgcctggggattagccgcaatacgctctatcgc
aaactgcgccaacacggtatttcacgaccgggttga
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