Pseudomonas psychrophila: G5J76_18640
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Entry
G5J76_18640 CDS
T06988
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00630
Glyoxylate and dicarboxylate metabolism
ppsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5J76_18640 (gcl)
Enzymes [BR:
ppsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
G5J76_18640 (gcl)
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
E1_dh
Motif
Other DBs
NCBI-ProteinID:
QIE34161
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Position
4136260..4138035
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AA seq
591 aa
AA seq
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MSKMRAIEAAVLVMRREGVDTAFGIPGAAINPLYSALQKVGGIDHVLARHVEGASHMAEG
YTRTKAGNIGVCIGTSGPAGTDMVTGLYSASADSIPILCITGQAPRARMHKEDFQAVDIT
TIVKPVTKWSTTVMEPGQVPYAFQKAFYEMRSGRPGPVLIDLPFDVQMAEIEFDIDAYEP
LPLAKPSATRLQAEKALALLDQAERPLLVSGGGVINADASDLLVEFAELTGIPVIPTLMG
WGTIADDHPLMVGMVGLQTSHRYGNATLLKSDVVLGIGNRWANRHTGSVDVYTEGRKFIH
VDIEPTQIGRVFNPDLGIVSDAGSALKVFLEVAREWKAAGKLKNRSAWLQDCQQRKATMQ
RKTHFDNVPVKPQRVYEEMNQVFGKDTCYVSTIGLSQIAGAQFLHVYKPRHWINCGQAGP
LGWTIPAALGVVKADPTRNVVALSGDYDFQFMIEELAVGAQFNLPYIHVVVNNSYLGLIR
QAQRGFEMDYCVQLAFDNLNAPELNGYGVDHVAVVQGLGCKALRVFEPSEIQPALRKAQE
LIKEFRVPVMVEIILERVTNISMGTEINAVNEFEDLALVGNDAPTAISMLD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatgagagcaatcgaagccgccgttctggtgatgcgtcgcgaaggtgtcgat
accgcattcggtatcccgggtgccgccatcaacccgttgtactcggccctgcaaaaggtc
ggtggcatcgatcacgtccttgctcgccacgtagaaggcgcctcgcacatggccgagggt
tacacccgcaccaaggccggcaatattggcgtgtgcatcggcacttccggcccggcaggc
accgacatggtgacgggcctctacagtgcctcagccgactcgatccctattctgtgcatc
accggccaagcaccacgggcacggatgcataaagaagacttccaggccgtcgacatcacc
accatcgtcaaacccgtcaccaagtggtcgaccaccgtgatggagccgggccaggtgccc
tacgccttccagaaagccttttacgaaatgcgctccggccgcccaggtcccgtgctgatc
gacttgccgttcgacgtgcaaatggccgagattgaattcgacatcgatgcctacgaaccg
ctgccactggccaaaccatcggcaacccggctccaggccgaaaaagccctggccttgctc
gatcaggccgaacgtccgctgctggtcagcggcggaggcgtgatcaacgctgacgccagt
gatctgctggtggagttcgccgagttgaccggcatcccggtcataccgacgctgatgggc
tggggcacgattgctgacgatcacccgctgatggtgggcatggtcggcctgcaaacgtcc
caccgttacggcaacgccaccctgctcaagtccgacgtggtactgggcatcggcaaccgc
tgggccaaccgccacaccggctcggtcgacgtttacaccgaaggtcgcaagttcatacac
gttgatatcgagcccacccagatcggccgcgtcttcaacccggatctgggcatcgtttcc
gacgcaggttccgcgctcaaggtattcctcgaagtggcccgcgaatggaaagccgccggc
aagctgaaaaaccgcagcgcctggctgcaagactgtcagcaacgcaaagccacgatgcag
cgtaagactcacttcgacaacgtgccggtcaagccccagcgcgtgtacgaagagatgaac
caggtgttcggcaaagacacgtgctacgtcagcaccatcggcttgtcgcagatcgccggc
gcgcagttcctgcacgtttacaagccgcgtcactggatcaactgcggccaggccggccca
ctgggctggaccattcctgcagcgctgggcgtggtcaaggccgacccgacccgcaacgtc
gtagcgctgtccggtgactatgacttccagttcatgatcgaagaactggcggtgggcgca
cagttcaacctgccgtatatccacgtagtggtaaacaactcctaccttgggctgattcgt
caggcgcaacgcggtttcgaaatggactactgcgtgcagttggctttcgacaacctcaac
gcacccgagctcaacggttatggcgtagaccacgtggccgtcgttcaaggcctgggctgc
aaggccttgcgcgtgttcgaacccagtgaaatccagcctgcactgcgcaaggcccaggag
ctgatcaaggagttccgtgtgcccgtgatggtggaaatcatcctggagcgcgtgaccaac
atttcgatgggcaccgaaattaacgccgtgaatgaatttgaagacttggcgctggtgggt
aacgatgcaccgaccgccatttcgatgctggattaa
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