Pseudomonas psychrotolerans: BJP27_06510
Help
Entry
BJP27_06510 CDS
T05074
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppsl
Pseudomonas psychrotolerans
Pathway
ppsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP27_06510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_06510
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP27_06510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJP27_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APQ11162
UniProt:
A0A4Y5W4X7
LinkDB
All DBs
Position
complement(1455736..1457745)
Genome browser
AA seq
669 aa
AA seq
DB search
MSAFQLSTRYTPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTM
VLAPNKTLAAQLYGEFKAFFPNNSVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINDHIEQ
MRLSATKALLERKDAIIVASVSSIYGLGSPEAYLKMVLHLDRGDRIDQRTILRRLAELQY
SRNDMEFARATFRVRGDVIDIFPAESDLEAVRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKTHYATPRETLLGAIENIKLELADRLEWLRSQNRLLEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRGPGEPPPTLYDYLPSNALLVIDESHVTVPQIGAMFKGDRSRKETL
VEYGFRLPSALDNRPLKFEEWEAGAPQTIFVSATPGPYEEEHAGRVIEQVVRPTGLVDPI
IEIRPATTQVDDLLSEIRLRVAQEERVLCTTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADSITGSMQRAIDETERRRNKQLAFNEEHGIVPQGIKKDIRDIMEGAAA
PGAKGKRRAAKVAEEQGEYAAELRSPSEIGKRIRQLEEKMLQLARDLQFESAAQLRDEIQ
ALRERLVQV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcattccaactgtccacccgctacaccccggccggcgaccagcccgaagccatt
cgccagatggtggaaggcctggaagcgggcctgtcgcatcagaccctgctgggcgtgacc
ggctcgggcaagaccttcagcatcgccaacgtcatcgcccaggtgcagcgcccgaccatg
gtgctggcgccgaacaagaccctggccgcccagctctatggcgagttcaaggcgttcttc
ccgaacaactcggtggagtacttcgtctcctattacgactactaccagccggaagcctat
gtgccctcgtcggacaccttcatcgagaaggactcgtccatcaacgaccacatcgaacag
atgcggctgtccgccaccaaggcactgctggagcgcaaggacgccatcatcgtcgcctcg
gtgtcctccatctacggcctgggcagtcccgaggcctatctgaagatggtcctgcacctg
gatcgcggcgatcgcatcgaccagcgcaccatcctgcgccggctggccgagctgcaatac
agccgcaacgacatggaattcgcccgggccaccttccgcgtacgcggcgacgtcatcgac
atcttcccggcggaatccgacctggaggccgtgcgcgtcgaactcttcgacgatgaggtg
gagagcctgtcggccttcgatcccctcaccggcgaggtgatccgcaagctgccgcgcttc
accttctatcccaagacccattacgccaccccgcgcgagaccctgctgggtgccatcgag
aacatcaagctggaactcgccgaccggctggaatggttgcgcagccagaatcggctgctc
gaagcccagcgcctggaacagcgcacccgcttcgacctggagatgatcctcgagctgggc
tactgcaacggcatcgagaactacagccgttacctctccggtcgcggtccgggtgagccg
ccgccgactctctacgactacctgccgagcaacgccctgctggtgatcgacgaatcccac
gtcaccgttccgcagatcggcgccatgttcaagggcgaccgttcgcgcaaggaaaccctg
gtggaatacggcttccgtctgccctctgcactggacaaccgaccactcaagttcgaggag
tgggaagccggggcgccccagaccatcttcgtttcggctactccggggccctatgaagaa
gagcacgccgggcgcgtcatcgaacaggtggtgcgacctaccggcctggtcgaccccatc
atcgagatccgcccggccaccacccaggtggacgacctgctctccgaaatccgcctgcgc
gtggcccaggaggagcgggtgctctgcaccaccctgaccaagcgcatggccgaggacctc
accgattacctcgccgatcacgacgtgcgggtgcgctacctgcactcggacatcgatacc
gtggagcgggtggaaatcatccgcgacctgcgcctgggtaccttcgacgtcctggtgggc
atcaacctcctgcgcgaaggcctcgacatgcccgaggtgtccctggtcgccgtgctcgat
gccgacaaggaaggcttcctgcgttccgagcgctcgctgatccagaccatcggccgggcg
gcgcgtaacctcaatggcaaggccattctctacgccgacagcatcaccggctccatgcag
cgcgccatcgacgagaccgagcgccgccgcaacaagcagctggccttcaatgaagagcac
ggcatcgtgccccagggcatcaagaaggacatccgcgacatcatggaaggcgccgcggcc
ccgggtgccaagggcaagcgtcgtgccgccaaggtggccgaagagcagggcgagtacgcc
gccgaactccgctcacccagcgagatcggcaagcgtatccgccaactcgaagagaagatg
ctgcaactggcgcgcgacctgcaattcgagtccgccgcccagctacgggacgagatccag
gctctgcgcgagcgcttggtccaggtctaa
DBGET
integrated database retrieval system
