Parasedimentitalea psychrophila: QPJ95_19305
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Entry
QPJ95_19305 CDS
T09434
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppso
Parasedimentitalea psychrophila
Pathway
ppso01501
beta-Lactam resistance
ppso01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QPJ95_19305
01503 Cationic antimicrobial peptide (CAMP) resistance
QPJ95_19305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppso02000
]
QPJ95_19305
01504 Antimicrobial resistance genes [BR:
ppso01504
]
QPJ95_19305
Transporters [BR:
ppso02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QPJ95_19305
Antimicrobial resistance genes [BR:
ppso01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QPJ95_19305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Molydop_binding
Big_6
Motif
Other DBs
NCBI-ProteinID:
WIY24644
UniProt:
A0A9Y2P3V2
LinkDB
All DBs
Position
3981809..3984937
Genome browser
AA seq
1042 aa
AA seq
DB search
MFSSLFISRPKFAIVISMVLTIMGLIGYTALPVSQFPDITPPVVSVTASYTGANAETVEK
SVAAPIEAQVNGVDDMIYMSSSSSDTGSYSLSVTFEVGTDPDIASVNVQNRVAQAMSGLP
TEVTSSGVVTQKSSTNMLLVATLTSPDGTYDDLFLSNYAEINIKDALSRVAGVGKADILN
RLSYSMRIWMNPEKMAALGITPGDLINSVKEQNLEVSAGQIGAPPIPGDQTFQYTIKSKG
RLTSVEEFGDIVIRTGEAGSTVRVKDVATVELGASNYNNSGYYDGRKATILAVYQAPGAN
ALAVSAAVLAELDRLATAFPDDVIYSVPFNTTDFVEQSLSDVISTLILAFALVVSVVFVF
LGSWRATIIPMVAIPVSLIGTFAFLLLLDMSLNTISLFALVLAIGIVVDDAIIVVENVER
LIAEEGLEPREATRKAMGQITGPVIATTLVLLAVFVPVTFMPGITGELFSQFAVTISVAV
VISSINALTLSPALCGLVLKARSGPPTGLLAKFERAIDVLRTGYLGIVSRLLRWPFLAVA
IVLAMYAGTGTIFGVTSKGFLPAEDNGYLFVDIQLPDAAALGRTEVVTKRVNGQIEQIPG
VRSTILVNGFSMLNGASANGAMIIINLDPWDERPTPDLGPTAILSQVYGIANGEAAASIV
AFNPPPISGLGMSAGVEMEVQQTAGGTPQDLAAAVGSLVYAANQRDEIGQSYTTFRANVP
QVYVDLDREKAKTLDVSIAEVFLTMQAHLGSYYINDFNLFGRVYRVMVQADGSYRDKIED
IGNLYVRSQGGKMVPLSTLIDVDNILGPVILKRHNMFRSATVTAVPVAGLSTGDAIRVMQ
QEAATALPPGYSFEWTGTAQQQLSSSGMVVVILGMAVLFTYLFLVAQYESWTMPVAILLS
VIVAMFGAVVAVAITGSDINLYTQIGMIMLIGMAAKNGILIVEFAMERRAAGLSIKEAAH
EAGRQRFRAVMMTAFSFLLGVVPLLIASGAGAASQKAIGVAVFGGMLMATVVGVILIPVL
YAFMQGLREWAKGTTKTETAAE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatccttgttcatttcgcgacccaagtttgcgatcgtgatttccatggtcctg
accatcatggggctgattggctatacggctctgccggtctctcagttccctgatatcacc
ccaccggtggtcagcgtcaccgccagttacaccggggccaatgccgaaaccgtcgagaaa
agcgtcgcggcccccattgaggcgcaggtgaacggcgttgatgacatgatctatatgtcg
tcaagctcgtcagacactggcagctattcgctttctgtcacttttgaagtcggtaccgac
cccgatattgcctcggttaacgtgcaaaaccgggtcgcacaggcaatgtccggcctgcca
acagaggtgacctcctcgggcgttgtgacccagaaaagttcgaccaacatgttattggtc
gctactctcacctcgccagacggcacttatgacgacctgtttctgtccaattatgccgag
atcaatatcaaggacgcgctaagccgcgttgctggtgttggtaaggctgatattcttaac
aggctcagctattcgatgcgcatttggatgaaccctgagaaaatggccgctttgggcatt
accccgggggatcttatcaattctgtaaaagagcagaacctggaagtctcggctggccag
attggcgccccaccgatcccaggcgatcaaacctttcaatataccatcaagtccaagggg
cggctgacatcggttgaagaattcggtgatatcgtcatcagaacgggagaggccggcagc
acggtacgcgttaaggacgtggcgacggtggaattaggggcgtcgaactacaacaactca
gggtattatgacggcagaaaagccaccattcttgcggtctatcaagcccccggcgccaac
gcgctggctgtttccgcagccgttttggcagaattggaccggttggcaacggcttttccg
gacgatgtgatctattccgtaccgttcaacacgactgattttgtggaacaatctctttcg
gatgttatttcgacactgattcttgcctttgctttggttgtctccgtggtctttgttttc
ctgggctcatggcgggccactatcattcctatggtggcgatcccggtatccttgattggc
actttcgcatttttgcttttgctggacatgtcgctcaatacaatctcattgtttgccctg
gtcctggccattggcatcgtggtggatgacgccattattgtggtggaaaacgtcgagcgt
ttgatcgccgaagaaggcctggaaccgcgagaggcgacccgcaaggcgatgggccagatc
accggtccggtgattgcaacaacgctggtcctgctggccgtttttgtgccggtcaccttt
atgccggggatcaccggcgagttgttttcgcaatttgcggtgaccatttcggtggcggtt
gtgatctcgtcgattaatgctttgaccctgtcgccagccctgtgtggcctggtgctcaag
gcccgctccgggccgccaaccgggctgctcgccaaattcgagcgcgcaattgatgtcctg
cggaccggataccttggtattgtgagccggttgctcaggtggccgtttttggcagtggcg
atcgtgctggctatgtacgcgggcacaggcaccatttttggggtaacctccaaagggttt
ctgcctgccgaggacaacggctatctgtttgtcgatatccagctcccggatgccgcagca
ctggggcgcaccgaagtggtgaccaaacgggtcaatggacagatcgaacagatcccgggg
gtacgcagcactattctggtcaacgggttcagcatgctgaatggggccagtgccaatggt
gccatgatcatcatcaatctggacccctgggatgagcggccaacgccggaccttggccca
accgccattctgagccaagtgtatggcatcgccaacggcgaggccgccgccagcatcgtg
gcgttcaacccgccaccgatttcgggtcttggcatgtcagccggcgtcgaaatggaggtg
cagcaaacggctggcggaacgccccaggatctggccgccgccgttgggtctttggtctat
gcagccaatcagcgcgacgaaatcggtcagtcctacaccacgttcagggccaatgtgcca
caggtctatgttgatctggaccgggagaaggccaaaactctggatgtctcaattgccgaa
gttttcttgaccatgcaggcccatttgggatcgtattacatcaatgatttcaacctcttt
ggtcgtgtctaccgggtgatggttcaggccgatggctcctaccgcgataagatagaggat
atcggcaacctctatgttcgctcgcagggcggtaaaatggttccgctctcgactttgatc
gatgtggataacatcctggggccggtcatcctgaagcgccataatatgttccgctcggcg
acggtgacggcggtgcccgtcgctggattgtccaccggcgatgcgatccgggtgatgcag
caagaggccgccaccgcattgccgccgggctatagctttgagtggaccggcacagcgcag
caacagctgtcctcctcaggcatggttgtcgtcattctgggcatggcggtactgttcacc
tatctgttccttgtagctcaatacgagagttggaccatgccggtggccattctgctctcg
gtgatcgtggcgatgtttggcgcggttgttgcggttgccatcaccggaagtgatatcaac
ctctacacccagattggcatgatcatgttgattggcatggcggcaaagaacggtattctt
attgtcgaatttgcaatggagcgccgcgccgcagggctgtcgatcaaagaggccgcacat
gaggccggccgccagcgtttcagagcggtgatgatgacggccttttccttcctgttgggg
gtggtgccactgctgattgcctcgggagccggtgctgccagccaaaaggccatcggggtc
gcggtgttcgggggaatgctgatggccaccgttgttggggtcattcttatcccggttctc
tacgcctttatgcaaggcctcagggaatgggccaaaggcaccacaaaaacggagacagcc
gcggaataa
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