Parasedimentitalea psychrophila: QPJ95_24000
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Entry
QPJ95_24000 CDS
T09434
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ppso
Parasedimentitalea psychrophila
Pathway
ppso00521
Streptomycin biosynthesis
ppso00523
Polyketide sugar unit biosynthesis
ppso00525
Acarbose and validamycin biosynthesis
ppso00541
O-Antigen nucleotide sugar biosynthesis
ppso01100
Metabolic pathways
ppso01110
Biosynthesis of secondary metabolites
ppso01250
Biosynthesis of nucleotide sugars
Module
ppso_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
QPJ95_24000 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QPJ95_24000 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QPJ95_24000 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QPJ95_24000 (rfbB)
00525 Acarbose and validamycin biosynthesis
QPJ95_24000 (rfbB)
Enzymes [BR:
ppso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QPJ95_24000 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
adh_short_C2
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WIY27830
UniProt:
A0A9Y2L319
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Position
pQS-3:558..1610
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AA seq
350 aa
AA seq
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MKILITGGAGFIGSAVVRRAIAAGHAVTNLDALTYAACLDNVASVADSPNYAFEQADIRD
RAALDRIFATHQPDAVMHLAAESHVDRSIDGPGTFIETNITGSFNMLEAARKYWAESGKP
DDFRFHHVSTDEVYGSLPNDPEVRFTEDSPYDPRSPYSASKAASDHLLRAWGETYGLPVL
LSNCSNNYGPFHFPEKLVPVVILNALAGKALPIYGDGSNIRDWLYVEDHAEALLCVLQKG
AVGRSYNIGGDNERSNLDLVQTLCEILDEKQPRGDGASYKDQITYVTDRPGHDARYAIDP
SRIRDELGWRPSVTVEQGLEKTVQWYLDNEAWWRALQTRDGVGERLGVKA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgatcaccggcggcgctggcttcatcgggtccgcagtggtgcggcgcgcc
attgcggccggtcacgctgtgaccaatctggatgcgctgacctatgccgcctgtctcgac
aatgtcgcctcggtggccgacagcccaaattatgcctttgaacaggccgacatccgcgac
cgcgccgcgctggaccgtatctttgcgacgcatcagcctgatgcggtgatgcatctggcg
gcggaaagccatgtggaccgctcgatcgatgggcccggcaccttcatcgagaccaatatc
accggcagttttaatatgctggaggctgcgcgcaaatactgggccgagagcggcaagccc
gacgatttccgctttcatcatgtctcgacggacgaggtctatggcagcctgcccaatgac
ccagaggtgcggttcaccgaagacagcccatacgacccgcgctcgccctattccgcctcg
aaggccgccagcgaccatctgctgcgggcctggggcgagacctacgggctgccggtgctg
ctgagcaattgctccaacaactacggccccttccattttcccgagaaactggtgccggtg
gtgatcctcaatgcgctggccggtaaggcactgccgatctacggcgatggcagcaatatc
cgtgactggctttatgtcgaggatcacgccgaggcgctgctctgcgtgctgcaaaagggc
gcagtggggcgcagttataatatcggcggcgacaacgaacggtcgaacctcgacttggtg
cagacgctctgtgaaatcctggatgagaagcaaccgcgcggggatggggcgtcctacaag
gaccagatcacttatgtcaccgaccgccccggccatgatgcgcgttatgccatcgatcct
tcgcgcatccgcgacgagctgggctggcggcccagcgtcacggttgagcaagggctggag
aagacggtgcagtggtatctcgacaacgaagcctggtggcgcgcgctgcagacccgcgat
ggggtcggcgagcgtttgggcgtaaaggcatga
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