Podospora pseudopauciseta: QC763_113350
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Entry
QC763_113350 CDS
T09815
Symbol
PRP5
Name
(RefSeq) pre-mRNA processing RNA-helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC763_113350 (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsp03041
]
QC763_113350 (PRP5)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC763_113350 (PRP5)
Spliceosome [BR:
ppsp03041
]
Complex A
U2 snRNP components
U2 related factors
QC763_113350 (PRP5)
Complex B
QC763_113350 (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
87928259
NCBI-ProteinID:
XP_062770963
LinkDB
All DBs
Position
1:complement(4997850..5001955)
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AA seq
1201 aa
AA seq
DB search
MARPRDSRSPSPAGSHAARKRKEDDRRDRDRRDGSRDRRRRSRSPDRRYRDRERDRDRDR
DSYRWRDRSLDRRDDDYYRGARRDGAGGGHRDRRRSRDRGPDRVRSPDRRRPRSRDGRDS
REGDRDYRSRKDDSRDRRPRRDGSTDRVDGTRPRGQPKPAESAAPIKPSEPAKSTPTPAQ
SEAEKKAERLRKLQAMKEKHAMKEAKEADVSAGSTRKLLAAMDQRAGGTVPSSPAKASPT
PTSPAPTTAAASPASTQDFVGKFDPKAIARNARGNRASSPTKLGDVKLGDVKLSSQGGSA
IVAKKEAGLLPTNRTLSTFGFQKAADNQKSTSKRKLDMDDEEIIKRKLVKLPDFALENAD
TTPYVDADADDDVEDDLDLVLGRNEEEMAEAQRILQERRDERIQKEGMAMEVDSEIPAAE
REDPIPADNAMDVDEEIDPLDAFMADLEQKVPSSGISSKPNGNQANGKKAFEPEAYYSDD
NYGYEADKADPSSILAMAAKKRKKDIPVIDYSKLELNKIRKNFWVEPLELSQMTEEEANE
LRLELDGIKVSGKNIPRPVQKWSQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRDV
IGVAKTGSGKTMAFALPMLRHIKDQDPVSGDDGPIALIMTPTRELCTQIYTDLLPFTKVL
KLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEAD
RMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKKVLRDPVEITVGGRSVVAPE
ITQVVEIIDESKKFVRLLELLGELYADDDDVRALIFVERQEKADDLLRELLRRGYGCMSI
HGGKDQEDRNSTISDFKKGVCPILIATSVAARGLDVKQLKLVINYDVPNHLEDYVHRAGR
TGRAGNTGTAVTFITEEQENCAPGVAKALEQSGQPVPERLNEMRKSWKEKVKAGKAKDAS
GFGGKGLERLDKEREAARLRERKTHKAEGEDEEDKGDDKDEETKKDKAKEAIQAAVSAIV
SRDASKTEAAEGKTSGGLEHGVIKSSGVIAGSSSAGAGKGGGALDKAASAISEINARLAR
AGQLRPGQPIDNKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGTY
YPPGKEPGPGQEAKLYILIEGDTEVVVGNALSELTRLLREGTIAAADAESRAPASGRYTI
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcccagagactcgcgctcaccatctcctgcaggaagtcatgctgcgcgaaag
cggaaagaggatgatcgacgcgaccgcgaccgtcgtgatggctcgcgtgatcgccgccgc
cgctcccgtagcccagatcgccgataccgtgaccgcgagcgggaccgagatagagatcgc
gactcatatcgctggagagaccgctccctagaccgccgagatgacgattattaccgaggt
gcacgtcgggatggtgcgggtggtggccaccgtgataggagacggtcacgcgatagagga
cctgatagggtgcgctccccagaccgtcgaagacctcgcagcagggatggtagggatagt
agagaaggggacagagactaccgttctaggaaggatgactcccgcgaccgcaggccccgc
cgggatggctcaacagaccgggtggatggcactcgaccccggggtcaacccaagccagca
gagagtgctgcaccaatcaagcccagcgagccagctaagtctacaccaaccccagctcag
tcggaagctgaaaagaaggctgaacggttgcgcaaacttcaagccatgaaggagaagcac
gccatgaaggaagctaaggaggccgatgtttcagccgggagcaccaggaaactacttgca
gctatggaccagagagccggcggcaccgtccccagcagccctgcgaaggcctcgcccact
cccaccagccctgcccccaccactgcagctgcatctccggcgtcaactcaggattttgtc
ggcaaattcgaccccaaggccattgccaggaacgccaggggcaaccgcgccagctcacca
accaagctgggcgatgtcaaacttggtgatgtaaaactgagcagccagggagggtcggcc
atagtagccaaaaaggaagccgggcttcttcccaccaacagaacactgagtacgttcgga
tttcagaaggctgctgacaaccaaaagtcaacctcaaagcgcaagctcgacatggacgat
gaggagattatcaagcgcaaacttgtcaagctccccgacttcgctttagaaaatgctgac
actacaccatatgtcgatgctgatgccgatgacgatgtcgaggacgacttggatcttgtc
ttgggtcgcaacgaggaggaaatggccgaagcacagcgaatcctccaagaacggcgcgat
gaacgcatccagaaagagggcatggctatggaggtagactccgagatccccgctgccgag
agggaagacccaataccagctgacaacgccatggatgttgacgaagagattgatcccctg
gatgcctttatggctgatctggaacagaaagttccaagcagcggcatatcgtcaaaacca
aatggcaaccaagcgaacggcaagaaggcgtttgagcctgaggcgtactacagtgatgac
aattacggttacgaggcagacaaggccgacccgtcatctattctcgccatggctgccaag
aaaagaaagaaggacattcccgttattgactatagcaagcttgagctcaacaaaatccgg
aagaacttttgggttgagccgctcgagctcagtcaaatgacagaggaagaagcaaacgag
cttagattggaattggacggcatcaaagtctctggcaagaatatcccgagacctgtgcaa
aagtggtctcagtgtggcctaacgcgacccatcctggacaccatcgaaggcctcggctat
gagaagcctacaccaatccagatgcaagccttgcccgtcatcatgtctggccgagatgta
atcggtgtggcaaagacgggctcaggcaagactatggcgtttgcgctcccaatgcttcgt
cacatcaaggatcaagacccagtgagcggcgacgatggcccaatcgccctgatcatgaca
cccacaagagaactgtgcacccaaatttacaccgacctgctgccgtttaccaaggttttg
aagcttcgtgcagttgctgcctatggtggcaatgctatcaaggaccagatcgccgagctc
aagcgtggcgccgagatcattgtcgctacacccggacgtatgattgatctcttggccgcc
aattctggacgtgtaaccaacctgaagcgtgccacgtatttggtgctggatgaagcagat
cgcatgtttgacatgggctttgagccgcaggtcatgaagattttcaataatgtcaggccg
gataggcagaccatcttgttttcagccaccatgcctcgcatcattgacgctctgacgaaa
aaggttcttcgggacccggtagaaatcacggtgggaggacgcagtgtcgtggcgcccgag
atcactcaggtcgtggagatcattgacgagtccaagaagtttgtccgcctattggagctt
ctcggagagctgtatgccgacgatgatgacgttcgcgccctgatctttgtggagcgtcaa
gagaaggcggacgatctgttgcgagagctcctgcgccgcggttacggctgcatgtccatc
cacggcggcaaagatcaggaagatcgcaactctaccatctctgatttcaagaagggtgtc
tgccctatcctcatcgccacctcagttgcggcccgcggtctggatgtgaagcagctgaag
ctggtcatcaactacgatgtccccaaccatttggaagattatgtccaccgtgccggccga
actggtcgggcaggcaacaccggtacagctgtcacttttatcaccgaagagcaagagaac
tgtgctcctggtgtggccaaggctctcgagcagagtgggcagcctgtcccggaacggctc
aatgagatgcgcaagtcctggaaagagaaagtcaaggctggcaaagccaaagacgccagt
ggatttggtggcaaaggtttggagaggctggacaaggagcgtgaagctgctcgtcttcgc
gagcgcaaaacccataaggccgaaggcgaggatgaagaagacaagggtgatgacaaggac
gaagagaccaagaaggacaaggcgaaggaagccatccaggctgctgtcagcgccattgtt
tctcgggatgcctccaagacggaggcggcggagggcaagactagcggtgggcttgagcac
ggtgtcatcaagagcagcggcgtcattgccggcagcagcagtgctggcgcgggcaagggt
gggggtgctttggataaggctgcctcagccatcagcgaaatcaacgcccggttggcgaga
gctggccagcttagaccaggccagccgattgacaataagggtccggatgcgggtgctttt
catgccacattggagatcaacgacttccctcaaaaggccaggtgggcggtcaccaaccgc
acgaacgtggccaaaatcttggaggctactgggacgtcgatcaccacaaagggtacttac
tatcctcccgggaaggagcccgggccgggccaggaggcgaagttgtatattcttattgag
ggtgataccgaggtggtggtgggcaacgcgctttcggagcttactcggttgttgagggag
ggcacgattgcggcggcggatgcggagagcagggcgcctgctagtgggaggtataccatc
acataa
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integrated database retrieval system
