Podospora pseudopauciseta: QC763_119420 Help Entry QC763_119420      CDS       T09815                                  Symbol SEN1 Name (RefSeq) DEAD-box type RNA helicase   KO K10706   senataxin [EC:5.6.2.-] Organism ppsp  Podospora pseudopauciseta Brite KEGG Orthology (KO) [BR:ppsp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ppsp03021]     QC763_119420 (SEN1) Transcription machinery [BR:ppsp03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      QC763_119420 (SEN1) BRITE hierarchy Motif Pfam:  SEN1_N AAA_11 AAA_12 AAA_19 AAA_30 UvrD-helicase Viral_helicase1 DEAD TFCD_C AAA_22 DUF5914 Integrase_H2C2 Motif Other DBs NCBI-GeneID:  87928873 NCBI-ProteinID:  XP_062771638 LinkDB All DBs Position 1:complement(7116265..7122949) Genome browser AA seq 2054 aa AA seqDB search MEGNLEQTIIEWHNDFEDFPPDAHLCCPKLNDDDLTDYENLDFPDEPDESGGGAVSVEEK KKRNEDYKHRLQISYNLSLLMGLPPERSSTWLPNWKERVETYLTRCDSCIRRWHRAREPF LQRLPECLRPEHIRVMETHLDDFDRGRIDRGLKEARDILERNGPMTTTKLVQHSISAVLA LFEALCSWKYLAFKDRIQDFDYVFENTQRKKPAKLPGGLLPSMTSFLFSESKYKRDFAEA AWDRREPESLKQDEWDWAVSPWLTESILWVSMSRGGNTPDKIPRFWRGFSKILRLLGEKQ IVNWLRAMEVSPNIYFLALEHLMTDSDEALLSVLQGLQGLMEKAPKAFWAAFAQLSPSTL VEQIFMSPGFRPLLNNSLLPERMESGGDSGDRVPALAGWLMAFIRSLPQIQRSDACDTVL QHLLSTFRQDPSCDRSAHATCTLSGLVALHECLKGFLDPENPFDTQTSLITVNQLLNKVL QYGEVIIGAAKLRPGDTYNIGLSKAGIAIIHSALALDARATEIEWKALVDRRPVQNIMNR DSGKLWESFLEMLWPSQLGHFELAEAMLQATLPLRAIEKFIPKRKEKLKKEHEVFNNRYQ QQTAAIGKVLNRMTDFTQLELANLCSSYGKTIQAIVSSLIHGEEAIREAGFELIKAITDE MVRSDAIERMVERHFQPFVQAITNAVETISAYKGEGAPWTHMIPILQCSDFVLNGLCDPS SGQLRRKTLTADERAVVKSWWRSVWRAIDHSFRMMRKWHEMVEKKVMEDFCRDVMELANK LFEQDGVLASALSHQESSETEIPTSDAMKDVLEPPRFYSFSLVDMLQLRDQYLISGIIRI VKQLITRMKQQDMALPPNTLLHLGKMIKDAKRSHGARPEYPTKTNLTDEQRIELLKALGE DAVIEEQFMGIKPGEKEARERALKQSKLDFFKATSKDYKDPLLSLTPTYDKNKSKLEQLK SEIVKPKQPTVLSPAAISAKQASLKEARAREKAEKAKRDAEAIAKARALRAPTKIVAGEG SGLQGIAGAKGKDHAPALKDEIMVGSSSEDEDESDDDDDDEVIVLKAKKANKTLSEADQR RLELLMAKNRGPVKKVKLMRSAKDMRARLIPPMDTLHLAILEWDIFHEGNDPPNGYRCAE VSNTYNDPVSYKQTFFPLLINEAWRSFVTAKDETTSKQFGIKVLSRMAVDKFVEVTASVP AAVSKDRGLSEGDIVLMSRGEDPLNQPEELHCLSRIWKTTYKKDIVEVVYRLNGRGNPIH QALVPGSEFSVVKITNMTTIEREYAALESLQYYDLMDEVLKAEPSPMLNFGDQAIKGVMD NYQLNLGQAKAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLLSNSLKGSNGAVSIPRP GLTAKPTTAPARKLLVCAPSNAAVDELVLRLKQGVKTMNGTHHKIEVLRLGRTDAINAGV KDVTLDEQVKARMEAVINSSGPSDREQMHKEAGEIKVKLSELRPKLDAAQAADDHQLMNK LKREYDDLMKRRAHIGARIEADKSSGNTFQREVEIKRRQVQQEILDKAQVLCATLSGSGH EMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGY DQSLFVRMQKNHAKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMAGLRLQPWHQSV YLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMKLYQRFRSDYSNVDARGKIGIITPYKA QLHRLRQRFTDKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMN VGLTRAKSSLWILGDSRALQQGEYWNKLIEDAKERDRYTTGNILAMLDSRGPQLPAAAFK QLGAPPPAPSRPRPTEDVEMPDAPSSNVEMPDVPPANLPYRRPSGPRDDMPPTIQPTVGS TGKKRARDSNDDGRPSKKIQQNANAARHNMNAAPPVMPRAATVKPPIDPSAMEVLGLAPP ERAPAAQPPRPQQWGQQPQVANGPGPGQGPRPNGPPNGQGQRPSVPPPGSRGPVPPARKP ASDPFIRRKPGPRR NT seq 6165 nt NT seq  +upstreamnt  +downstreamnt atggagggcaatctcgaacagaccatcatcgaatggcacaatgatttcgaagacttccca cccgacgctcacctgtgctgcccgaaattaaacgacgatgatctcaccgactatgagaac ctcgacttccccgatgagcccgacgagtctggcggcggcgccgtgtccgtcgaggaaaag aaaaagcgaaacgaggactacaagcatcgcctccagatatcatacaacctcagcctcctg atgggactcccgccagagcgctcgagcacatggcttcctaattggaaggagcgtgttgaa acataccttacacggtgcgactcgtgcatacgacgctggcaccgagcacgggaacccttt ctgcaacgcctccccgaatgcctgcgccctgagcatatccgtgtcatggaaacccacctg gacgatttcgacaggggacgcatcgaccgtgggctgaaggaagccagagatatacttgaa aggaatggtccgatgacaacaacgaagttggtccagcacagcatctcggcagtcttggct ctctttgaggcactctgcagttggaagtatcttgcgttcaaggatcgcatccaggacttt gactatgtttttgagaacacccagcgtaagaagcccgccaaattgcctggcggtttgctt ccatcgatgacgtcctttctcttctccgagtcaaagtacaagagggactttgccgaggcc gcttgggaccggcgagaacccgaaagcttgaagcaggacgagtgggattgggccgtatct ccctggttgacagagtcaatcctgtgggtttcgatgagcagagggggcaacactccagat aagatacccagattctggcggggcttttcgaaaatactgcggctgttgggcgagaaacaa attgtgaactggcttcgagcaatggaggtctcgcccaatatttattttcttgccctggag cacttgatgacggattcagacgaggccctgttgtcggtcttgcaaggactccaaggtctc atggaaaaggcacccaaagcgttttgggctgcgtttgctcagctttcgcccagcaccttg gtggagcaaatcttcatgagcccaggctttcgtccgctcctgaacaattcgcttctgccc gagaggatggaatcgggaggcgacagtggcgacagggtaccggcattggctggctggcta atggccttcattcgttcactgccgcaaatccagcgctcagatgcatgcgacactgttttg cagcatctcctgagcacgtttcggcaggatccgtcgtgcgaccgctcagcacatgctact tgcactctctcgggcttggttgctctccacgaatgcttgaagggcttcttggacccagag aacccattcgacacacagacatccctcatcacggtcaatcagctgctgaacaaagtactc cagtatggtgaagtcatcattggggccgcaaagctgaggcctggggacacatacaacatc ggtctctccaaggccggcatagccattattcactcagctttggcccttgatgcgcgagcc acggagatcgaatggaaggccctagttgatcgccggccagtccaaaatattatgaatagg gattccgggaaactgtgggagtcttttcttgagatgctctggccctctcagctcggccat ttcgaactggcagaagctatgctacaagctaccctgccgctacgtgccatcgagaagttc atccctaagcgaaaggagaagctcaagaaggaacacgaggtattcaacaatcgatatcaa caacaaacagctgctattggaaaagtcctgaaccgcatgaccgactttacgcagttagag ctagcaaacctgtgctccagttatggcaagacgatccaagccatcgtgtcatcgctcatc catggcgaagaggcaattcgcgaagctggctttgagctgatcaaggccataactgacgaa atggttcgcagcgatgccattgaaaggatggtggagaggcatttccagccgtttgtgcaa gctatcaccaatgctgttgaaaccatctcggcgtacaagggtgaaggtgcaccttggact cacatgatccccatcctccagtgcagcgacttcgtactgaatggcctttgcgatccatcg tccggtcagttgagacgcaagaccctgacggccgatgagcgggccgtcgtcaagagctgg tggagaagtgtttggagggccatcgatcactcgtttaggatgatgaggaagtggcacgag atggtcgagaagaaggtgatggaggacttttgtcgagatgtcatggagctcgccaacaag ctgtttgagcaagatggtgttcttgcctctgctctaagccaccaagagagcagtgaaact gaaatcccgacctcagacgccatgaaggatgtcctcgagccgcctcggttctattctttc tcgctggtggacatgcttcagctccgtgatcagtaccttatctctggtattatcaggatc gtcaagcagctgattaccagaatgaagcagcaggacatggcactgcctccaaacaccttg ttacacctgggcaagatgatcaaggacgccaagcgatcacatggcgccaggccagagtat cctactaagacaaatctgacggacgagcagcgcattgaactactcaaggctctcggagag gatgccgtgatcgaggagcagttcatgggcatcaaacccggcgagaaagaggctagagag cgcgctctcaagcagagcaagcttgacttcttcaaggcgacctccaaggactacaaagat cctctgctcagcctcacaccgacgtatgacaagaacaagtcgaagctggagcagctgaag tccgagatagtcaagcccaagcagccaacagtgcttagtccagccgctatttctgcaaag caggcctctctcaaggaggcgcgagctagggagaaggccgagaaggccaagcgtgacgcc gaagctattgccaaggccagagctttgcgtgcgccgacaaagattgtggcaggtgaaggc tctggtttgcaaggcatcgctggtgcaaagggcaaagaccatgccccggcgttgaaggac gaaatcatggttgggtcgtcttcggaggacgaggacgagtcggatgatgatgatgatgat gaggtgattgttctcaaggccaagaaggcgaacaagaccttgagcgaggctgatcaacgt cgtcttgagctcttgatggcgaagaaccgcggacctgtgaagaaggtcaagctcatgcgg tctgccaaggatatgcgtgctcgtttgatccccccgatggacacacttcaccttgcgatt cttgaatgggatatttttcatgaagggaatgaccctccaaatgggtatcgctgtgcggaa gtctccaacacgtacaacgatcccgtcagctacaagcaaacgtttttccccctgctcatc aatgaagcctggcggtcgttcgtgacggccaaggatgaaactacctcgaagcaatttggg atcaaggttttgagtcgtatggcggttgacaagtttgtcgaggtcacggcttcggtgcct gctgcggtttccaaagaccgtggtctctcggaaggcgacattgtgttgatgtcaagagga gaggatcccttgaaccaaccggaggagttgcattgtctttctcgtatctggaagacaacc tacaagaaagacatcgtcgaggttgtctatcggctgaatggtaggggaaatccaatccat caggcccttgttccgggtagcgagttctcggtggtcaagatcaccaacatgaccacaatc gagcgcgaatatgctgctctggaaagcttgcagtactatgacttgatggatgaggttctc aaggctgagccgtcgccgatgctcaactttggcgatcaggctatcaaaggggtgatggac aactaccaactcaatcttgggcaagcaaaggccatcttgaatgcgaaggagaatgatggg tttactttggtacagggccctccgggtacgggcaagactaaaaccattgtcgccatggtt ggctgcctgttgtcgaactccctcaagggttccaatggtgccgtcagcatcccccggccg ggactcacggcaaaacccaccacagccccggccaggaagctgcttgtctgtgcccccagt aacgcagccgtggatgagctggtcctgcgtctcaagcagggcgtaaagacaatgaacgga acccaccacaagatcgaggtgctgcgtctcggtcgaactgacgctatcaacgctggtgtt aaagacgtgaccctggatgagcaagtcaaggcacggatggaagcggtgatcaacagcagt ggacccagcgaccgcgagcaaatgcacaaggaagctggcgagatcaaggtcaaactctcc gagcttcggccaaagcttgatgctgctcaagctgccgatgatcatcagttgatgaacaag ctgaagagagagtacgacgacctgatgaaacgccgtgcccacatcggagctcgcatcgag gccgataagagcagtggaaacacgttccaacgtgaggtcgagatcaagcgccgacaggtt cagcaagaaattctcgacaaagctcaggtcttgtgtgccacactgagcggtagcggccac gagatgttcaagaatctcaatgtcgagtttgagacggtcatcattgatgaggcggcccaa tgtgtggagcttagtgcactcattccgctcaagtatggctgctcaaaatgcattctggtc ggtgatcccaagcagctgccgcctaccgttctctctcagtctgctgctagatacggctac gaccagagcttgttcgtccgcatgcaaaagaaccacgccaaagatgtccacctgctcgac atgcagtatcgcatgcaccccgaaatcagcaggttcccaagcaaggagttttacgaaggg ctgctccaagacggcgccgacatggcaggcttgcgtctccagccgtggcaccagagcgtc tatcttggcccttaccggttctttgatgtcaagggttcgcaatcgcgtgggcctaaaaac cagtccctggttaacgaggaagagctcaaggttgctatgaaactgtaccagcgcttccgc tctgactacagcaacgtcgatgccagaggcaagatcggcatcattactccctacaaggct cagcttcacagattgcgacagaggttcaccgacaagtatggtgagggcattacagaggag atcgagttcaacactaccgatgcgttccagggtcgtgagtgtgagatcatcatcttctct tgcgttcgcgccagcccgactggtggtatcggtttcatgactgatattcgccgcatgaac gtcggtctgacacgtgccaagtcatccctgtggattttgggtgactcccgggcgcttcag cagggtgaatactggaataagctcattgaggacgccaaggagcgtgaccggtacaccacc ggtaacattctggccatgctggacagccgtggtccgcagttgccagctgccgcctttaaa cagctgggtgccccccctcctgcaccatctcgcccacgcccaaccgaagatgttgagatg cctgatgcgccttcttctaatgtggagatgcctgatgtgcctccagccaacctgccatat cgtcgcccaagcggtcctcgtgatgacatgccgcccactatccagccaacggttggatca acaggaaagaagcgggcgcgcgatagcaacgacgacggccgcccgtccaaaaagattcaa cagaacgcgaatgcggcgcgtcacaatatgaatgccgctccaccagtcatgccgagagca gccacggtgaagccacccatcgacccgtcagctatggaggtgttgggcctggcgcccccg gagagggcacctgcggctcaacctccacgtccgcagcaatggggtcagcagcctcaggtg gcgaatgggccgggaccaggacagggcccgagaccgaacgggccgcctaatggacagggc cagaggcctagtgtacccccgcccggatctaggggaccggtaccgccagcacgcaagcca gcgagcgacccctttattaggcggaaaccagggccaagacgttaa

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