Podospora pseudopauciseta: QC763_201600
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Entry
QC763_201600 CDS
T09815
Symbol
DBP5
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03013
Nucleocytoplasmic transport
ppsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC763_201600 (DBP5)
03015 mRNA surveillance pathway
QC763_201600 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsp03019
]
QC763_201600 (DBP5)
Enzymes [BR:
ppsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC763_201600 (DBP5)
Messenger RNA biogenesis [BR:
ppsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
QC763_201600 (DBP5)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
AAA_22
Motif
Other DBs
NCBI-GeneID:
87929539
NCBI-ProteinID:
XP_062767959
LinkDB
All DBs
Position
2
Genome browser
AA seq
464 aa
AA seq
DB search
MADLASRISKPEEGAAPQVDDPTEGANSVGIVENAYDVEVKLADLQNDAESPLFSVQSFE
QLGLPKAINDGLLAMNFKKPSKIQERALPLMISDPPTNMIAQSQSGTGKTAAFVLTCLAR
VDLAKPQQPQALLLAPSRELARQIQGVVQTIGQFCENLIVQAAIPGEVSRETGVRASIVV
GTPGTVMDLIRRRQFDVSQLKLLVIDEADNMLDQQGLGEQCVRVKTLLPKTIQILLFSAT
FPDNVHRFAQQFAPKANEIKLRHTELTVKGISQMYMDCPDEGKKYDVLCKLYGLMTIGSS
VIFVRTRESANEIQRRMEADGHKVSALHGAFEGQNRDALLDDFRSGRSKVLITTNVLARG
IDVSSVSMVINYDIPMKGPDAGMPDYETYLHRIGRTGRFGRVGVSISFVYDRRSYEALSD
IANHYGIDLVQLSPDDWDLTEKKVQDVIKSSRARPDYAPNALGN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgcgagccgcatctccaagccggaggagggcgctgccccccaagttgat
gacccgaccgagggtgccaatagcgttggcatcgtcgagaacgcctacgacgtcgaggtc
aaactcgccgatcttcaaaatgatgccgaaagcccgctcttctccgtccagtctttcgag
cagcttggcctccccaaggcgatcaacgatggtcttttagctatgaacttcaagaagcca
tccaagatccaagagagagctctccccctcatgatcagcgaccctcctacaaatatgatt
gctcagtcccagtccggcaccggcaagactgctgctttcgttctcacttgcctggcgcgc
gtggacctcgccaagccgcaacagcctcaagctctccttctggctccgagcagagagctt
gctcggcaaattcagggcgtcgtccaaacaatcggtcaattttgtgagaacttgatcgtg
caggccgccatccccggcgaagtctcgcgtgagactggtgtcagggccagcatcgtggta
ggaactccaggcaccgtcatggacctgatcagacgtcgccagttcgatgtgtctcagctg
aagttactcgtcattgacgaggcggacaacatgttggaccagcagggtctcggtgagcag
tgtgtgcgtgtcaagactctacttcccaagaccatccaaattcttcttttttccgccacc
ttcccagacaatgtccaccggttcgcgcagcagtttgcgcccaaggcgaacgagatcaaa
ctccgacacacggagctgacagtcaagggcatttctcaaatgtacatggattgcccggac
gagggcaagaagtatgatgtgctttgcaagctctacggtctcatgaccattggctcgtcc
gtcatcttcgtccgcactcgtgagagtgccaacgagattcagcgccgcatggaagctgat
ggccacaaggtgtctgcccttcacggtgccttcgagggccagaaccgtgatgctctcctc
gacgacttccgctccggtcgttccaaggttctcatcaccaccaacgtcttggctcgtggc
attgatgtgtccagcgtgtccatggtcatcaactacgacattccgatgaagggccccgac
gctggcatgccagactacgagacctatcttcaccgtatcggccgtactggtcgttttggt
cgtgttggcgtctctattagttttgtctacgacagacgaagctacgaggccctttccgac
attgccaatcactacggaatcgaccttgttcagctcagccctgacgactgggacttgact
gagaagaaggtgcaggacgtgatcaagtcgagccgtgcccgccccgactacgctcctaat
gcccttgggaattag
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