Podospora pseudopauciseta: QC763_308890
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Entry
QC763_308890 CDS
T09815
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03022
Basal transcription factors
ppsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC763_308890
09124 Replication and repair
03420 Nucleotide excision repair
QC763_308890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsp03021
]
QC763_308890
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_308890
Transcription machinery [BR:
ppsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QC763_308890
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QC763_308890
BRITE hierarchy
Motif
Pfam:
Ssl1
C1_4
VWA_2
zf-HIT
Tfb4
Motif
Other DBs
NCBI-GeneID:
87931682
NCBI-ProteinID:
XP_062767366
LinkDB
All DBs
Position
3:3161961..3163868
Genome browser
AA seq
495 aa
AA seq
DB search
MADSDDEYVGDLSGDDAGVDSVYGTRSKDGGKGKGGQKGKGTRKAAWEEVHRAWDEVAIA
EDGSITVAELIEAEKRRRLMRDTTPIQRGIIRHMVLVLDMSIAMAEKDLLPNRFALTFSY
AMEFVNTFFQQNPISQLGIIGMRDGIAVRISDMSGNPVEHIEKLRQWALKDPIGNPSLQN
ALEIHTPSHGTREVLIIYGALLSSDPGDISDTITSLIADRIRVSIIGLAAQVAICAELCA
RTNDNDDSQYRIALHEQHFRELFLAATTPPVTHEAEQSNASLLMMGFPSRSLASKDFVSL
CACHNKPTREGYTCTRCRIKVCRLPASCPVCGLTLILSIHLARSYHHLFPLKSWVAVPWT
EAKKSVACFSCQTPFPPVPKAAPPKIKLKVKESSGVGGQTAANIAKAKGRGEVPAKTNTV
TAPTPGLLPEAIKAGVSESGRYKCPECEEHFCIDCDIYAHETIHNCPGCLARLVKSQQQQ
QEEVVGAGEAMEVDS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccgacgacgaatatgtcggggacctctctggtgacgatgccggagtcgac
agcgtctacggtacacgatcgaaagatggcggaaaaggaaaaggtggccagaagggcaag
ggaacccgcaaagcagcttgggaagaagtccaccgagcctgggacgaggttgccattgcc
gaagatggcagcatcacagtggccgagttgatcgaggccgagaaacgccggcggttgatg
cgggataccacaccgatccaacgtggaataatacggcacatggtgttggtgttggacatg
agcatcgcaatggcagagaaggacctgcttccgaaccgcttcgccctcaccttctcctac
gctatggaatttgtgaacacattctttcagcagaatccaatcagtcagctggggatcatc
gggatgcgcgatggtattgccgtcaggatcagcgacatgagtgggaacccagtcgagcac
attgagaagctgaggcagtgggcgcttaaggaccctattgggaacccaagtcttcaaaat
gccctcgaaatccacaccccctcccacggcacccgcgaagtcctcatcatatacggcgcc
ctcctctcctcggacccaggcgacatctccgacaccatcacctccctcatcgccgaccgc
atccgcgtctccatcatcggcctcgccgcccaggtagccatctgcgccgagctctgcgcc
cgcacaaacgacaacgacgactcccaataccgcatcgcccttcacgagcagcactttcgc
gagctcttcctcgccgccacgacaccccccgtcacccacgaggcagagcaatcaaacgcc
tccctcctcatgatgggcttcccctcccgctcccttgcatcaaaagattttgtctccctc
tgcgcctgccacaacaaaccaacaagagaagggtacacctgcacgaggtgtagaatcaaa
gtctgccggttacccgcgtcttgtcccgtttgcgggctgacgctgatattgtcgattcac
ctggcgagatcgtatcaccacctttttcccctcaaatcatgggtggcggttccgtggaca
gaagcaaagaagtcggtggcgtgtttttcctgtcagacgcccttcccgcctgtcccgaag
gctgcgccgccaaagatcaagttgaaggtgaaggagtcttccggtgttggggggcagaca
gcagccaatatcgccaaggcaaaaggcagaggggaggtgcctgcaaagacgaatactgta
acggcaccgacgccagggttgttgccagaggcgatcaaggccggggtgagcgagagcggg
aggtataagtgtccagagtgtgaggagcatttttgcatcgattgcgatatttatgcccac
gagacgattcataactgtccggggtgtttggcgaggctggtgaagagtcagcagcaacaa
caggaggaagtagtaggggcaggggaggcgatggaggtggattcatga
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