Peribacillus psychrosaccharolyticus: I6J18_06230
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Entry
I6J18_06230 CDS
T07206
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J18_06230 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsr03019
]
I6J18_06230 (rny)
Messenger RNA biogenesis [BR:
ppsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6J18_06230 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
MctB
DUF4191
KH_2
DUF4407
UPF0154
DUF1043
DUF4229
Motif
Other DBs
NCBI-ProteinID:
QQT01459
UniProt:
A0A974NP33
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All DBs
Position
complement(1137866..1139428)
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AA seq
520 aa
AA seq
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MEPITVIISILLGLIVGAVVGYFIFKTTFENKITGAKGSAETILDDAKREAEATKKEALL
EAKDEIHKVRTDAEREVRERRAELQKQENRLLQKEENLDRKDETLDKRESLLEKKDDSLN
QRQQHIEEMESKVDEMVRKQQSELERISALTRDEAKAIIIDRTENELAHDIALMVKETEN
RAKEDADKKAKEILSIAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVDKARREVDEQIR
EFGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAQLSGLLAAELGEDETL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYREHPVVINSIASHHGDTEPTSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRILVKPEQID
DLEAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaacctataacagtcatcatctccattttgcttggcctaatcgtcggtgcagttgtt
ggttattttatcttcaagactacatttgaaaataagataacgggggcaaaaggttccgca
gaaacgattttggatgatgccaaacgtgaagcggaagccactaaaaaagaagccctattg
gaagcaaaagatgagattcataaagtgcgtactgatgctgagcgagaagttcgcgaacga
agagcagaattacaaaaacaagaaaatcggttattgcaaaaagaagagaaccttgatcga
aaagatgaaacgttggacaaacgtgaaagccttttagaaaaaaaggacgactctctaaac
caaagacaacagcatattgaagagatggaaagcaaagtggatgaaatggttcggaagcag
caatcagagctagaacgtatttcagctttaacccgtgatgaggcaaaagcaattataatt
gatcgtacggagaatgagctggctcatgatattgcgcttatggtaaaagaaacagaaaat
cgtgcaaaagaagatgccgataagaaagcgaaagaaattctttcaatcgcaattcagcgt
tgtgcagcagatcatgtagcagaaaccaccgtttctgtagtgaatcttccaaatgacgaa
atgaaagggcgtattatcggtcgtgaaggacgaaatattcgtactcttgaaacgcttaca
ggtattgatttaattattgatgatacgcctgaagcagtcattctttcaggattcgaccca
attcgccgtgaaacagctcgtttagctcttgaaaaacttgttcaggatggacgaatccat
ccagcacgtattgaagaaatggtcgataaagcaagacgggaagttgatgaacaaatccgt
gaattcggtgaacaaactacatttgaagtaggcgttcatggtctccatccggatctaatc
aaaattcttggccgtctgaagttccgtacaagttatggtcagaacgtgctgaagcattct
gtagaggttgctcaattatcaggcttgctggctgcggagctgggtgaagatgaaacgctt
gcacgcagagcaggtctgttacatgatattggtaaagcaattgatcatgaagttgaagga
agccatgtagaaattggtgtggaacttgcaacgaagtacagagaacatccagttgttatt
aacagtattgcttcacatcatggcgatactgaaccaacatctgttattgctgtgttggtt
gctgctgcagatgcgctttcagctgcaaggccgggcgctcgtagtgaaacactagaaaat
tatattcgccgcctggaaaaactagaggaaatctcggaatcttatgatggtgttgagaaa
tcatttgctatccaagcaggacgagaagtacgtatccttgtaaaaccagagcaaattgat
gatttagaggcacatcgtctcgctcgtgatatccggaaacggattgaagaagaactagat
taccctggtcatatcaaagtaacggtgattcgggaaactagagccgttgaatatgctaag
taa
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