Pseudomonas putida S16: PPS_0258
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Entry
PPS_0258 CDS
T01570
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt00521
Streptomycin biosynthesis
ppt00523
Polyketide sugar unit biosynthesis
ppt00541
O-Antigen nucleotide sugar biosynthesis
ppt01100
Metabolic pathways
ppt01110
Biosynthesis of secondary metabolites
ppt01250
Biosynthesis of nucleotide sugars
Module
ppt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PPS_0258
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PPS_0258
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PPS_0258
Enzymes [BR:
ppt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PPS_0258
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Peptidase_S49
Motif
Other DBs
NCBI-ProteinID:
AEJ10843
UniProt:
F8FX41
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All DBs
Position
complement(298713..299258)
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AA seq
181 aa
AA seq
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MNIIPTAIPEVLIIEPKVFGDSRGFFFEAFNAREFARQTGVNVQFVQDNHSRSIKGVLRG
LHYQVENTQGKLVRVVQGEIRDIAVDVRKSSPTFGQWVAVQLSADNHRQLWIPPGFAHGF
AVMSESAEFLYKTTDYYNPGADRCIRWDDPTLAIDWGLQQPPVLSDKDKLGLPLAEAELL
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatccctaccgcgatccctgaagtactgatcatcgagccgaaggttttcggt
gatagccgtggttttttcttcgaggcattcaacgcccgtgagttcgcccggcaaaccggc
gtgaatgtccagttcgtccaggacaaccactcgcgctccatcaagggtgtgctgcgtggc
ctgcactaccaggtggaaaacacccaaggcaagctggtgcgcgtggtgcagggggaaatc
cgtgatattgccgtggacgtgcgcaagagctcgccaaccttcggccaatgggtcgcggtg
cagctgtcggccgacaatcatcgccagttatggattccccccggcttcgcccatggcttt
gcggtgatgagcgagtcggccgagttcctctacaagaccaccgactactacaacccgggc
gccgaccgctgcatccgctgggatgacccgacgctggccatagactgggggttgcagcag
ccacccgtgctctcggacaaggacaagctcggcctgccgctggcagaggcggaactgctg
ccttaa
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