Pseudomonas putida KT2440: PP_3255
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Entry
PP_3255 CDS
T00114
Name
(GenBank) non-homologous end joining protein
KO
K10979
DNA end-binding protein Ku
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PP_3255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppu03400
]
PP_3255
DNA repair and recombination proteins [BR:
ppu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PP_3255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
AAN68862
UniProt:
Q88HU8
LinkDB
All DBs
Position
3689720..3690541
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AA seq
273 aa
AA seq
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MARAIWKGAISFGLVHIPVALNTAVRTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDN
IVKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTPDRRGG
KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDA
SVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGDT
GAAEKGADILDLTELLKRSLGGKKPVKKTRKAS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgccatcagttttggccttgtgcacatccccgtggca
ctcaataccgccgtgcgcaccgagcgcgtggacttcgactggctggacaagcgcagcatg
gagccggtcggctacaagcgggtgaacaaggtgaccggcaaggaaatcgacaaggacaat
atcgtcaagggcgtagagttcgagaagggccgctatgtggtgatcagtgaggaggaaatc
cgcaaggcccggcccgaaacgacccagacgatcgacatcttttcctttgtggaagcgggc
gatattccgctgcagcatttcgatacgccgtactacctgaccccggaccgccgtggcggc
aaggtgtatgccttgctgcgcgagacgctggaaaagaccggcaaggtggcactggccacc
gtggtattgcatacccggcagcacttggcgctgctgcggcctctggaccatgcgctggtg
atgatcaccttgcgctggcctgaagaggtgcgcgggctggaaacgctggagctggatgcc
agcgtgaccgacagcaaggtggagaagcgtgagctggagatggccaagcgcctggtagag
gacatgagcgggccctggaagcctgaggattatcatgacgccttccgccagacgatcatg
gacctggtggaagagaaggccagcaagggcaagatcgaggcggtggagaagggcgacaca
ggggcggccgagaaaggtgcggacatcctcgacctgaccgaactgctcaagcgcagcctg
ggtggcaagaaaccggtgaagaagacgcgaaaggcttcatga
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