Pungitius pungitius (ninespine stickleback): 119216263
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Entry
119216263 CDS
T07626
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119216263 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119216263 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119216263 (usp13)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119216263 (usp13)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119216263 (usp13)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119216263 (usp13)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119216263 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UBA_4
Motif
Other DBs
NCBI-GeneID:
119216263
NCBI-ProteinID:
XP_037324814
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAAGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQELESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALDHFKETKYPLAVK
METITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKKTENGHHTDNSSRPRVSEW
EVIQESGMKLKAVFGSGYTGVKNLGNSCYLGTVIQVLFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEENKVSHWHQQKGVSPRMLKALV
SRGHPEFSSNRQQDAHEFFQHIVNLVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAATNREELVAYETKRREAEENTQAPPEPVTARIPFTACLQAFTEPEN
VPNFWSSALQAKSAGVKTSRFSSFPEYLVLQIKKFTFGVDWVPKKIDLAIDVPDFLDLSR
LRATGLQTSEEELPDLLPPIVLPEDTTDNSMGSIDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPSMMDPGPSTSDSPTGASPLANSPPEESI
SILTSMGFPRTHSIQALKATNNNLERALDWIFIHPEQEESDALSDTADTQTNDNAFSNGN
NTHSDATLSPDRDASGPRVKDGPGRYELFAFISHMGSSTMSGHYVCHIKKEGRWVIYNDH
KVCLSERPPKDLGYIYFYHRLSSS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccctacatgcccaccatcagagtgcccagg
acgggggacagggtctacaagagcgagtgcgccttctccttcgactccccggagtcggag
ggagggctttatgtgtgcatgaacacattcctgggctttggacgagaacatgtggagaga
cattatcgcaaaacaggacagagcgtctacatgcacctcaaacgacacgtcaaagagaaa
gccacaggagcagcagcaggcgccatccccagacgaaggaacggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaggactatgaatacgaagacgaggccaagctg
gtcattttcccagaccacttcgagatccccttaccaaatattgaggagttacccgccctg
gtgaccatcgcctgtgatgcagtgctcaatgcgccatcagcttacaagaagcaggagctt
gaatcctgggaggaggagatccaggtgtccagacatgccagaagtctcagacagctggac
aatggggtcaggatcccacccagtggctggaagtgtcagaagtgcgagatgagggaaaac
ctgtggctgaacctgacagatggagcagtgctctgtgggaagtggttcttcgatggcagc
ggaggcaacggccacgcgctggaccacttcaaagagaccaaataccccctggctgtcaaa
atggaaaccatcaccccagacggagcagatgtctactcatttgaggaggaggaagccgtg
ttggaccctcacatatcggaacacttgtcacactttggaatcgacatgctacagatgcag
aaaaagacagagaacggtcaccacacagacaatagctcccggccgcgggtcagtgaatgg
gaggtgatccaagagtcgggcatgaagctcaaagcggtgttcggttctggttacacaggc
gtcaaaaacctgggaaacagctgctatctcggcacggtgatccaggtcctgttcagcatc
ccggacttccagaggatgtatgtgggtaaccttcagaggatatttgactattcccccctt
gatcccagccaggactttgccacacaaatggctaaactgggacatggactgctctcgggc
cagtactccaagccacccatgaaatctgagctcattgaacaggtgatgaaggaagaaaac
aaggtatcacactggcaccagcagaaaggcgtctctcctcgtatgttgaaggcattggtc
agcaggggacaccctgagttttcctcgaacagacagcaagatgcccacgagttcttccag
cacatcgttaacctggtggagaggaacagtgccggctcagagaacccaagcgacgtcttc
cgcttcctggtggaggagcgagttcagtgctgccagacacgtcgggttcgttacacgcaa
cgagtggactactgcatccagctgccggctcccattgaggcggccaccaatcgagaggag
ctggtggcatatgagaccaagcggagggaggccgaggagaacacgcaggctcctcccgag
ccggttacagcacggatccccttcaccgcctgcctgcaggccttcacagagccggagaac
gtccccaacttctggagctcagccctgcaggccaaatcagcaggggtgaaaacttcccgt
ttttcctcctttccagagtacctggttttgcaaatcaagaaattcacatttggggttgac
tgggtgccaaagaaaatagacttggccattgatgttccagacttcctggatctgagcagg
cttcgggctactgggctgcagacgagtgaagaggagctgcctgacctcctgcctcccatt
gtgcttcctgaagacaccacagacaactccatgggctccatagactctccggaaatagac
gaggcggcagtgatgcagctggcagagatgggctttccactggaggcctgcaggaaggcc
gtctattacaccggcaacatgggcccggagatggccttcaactggatcatagcccacatg
gaggagcccgactttgcagaacctctcgctctgccctccatgatggatcctggtccttcc
accagcgacagccccacgggggcctccccgctggccaactcgccccccgaggagagcatc
tccatcctcacttcgatgggcttcccccgcactcacagcatccaggcactcaaagccacg
aacaataacctggaacgggcactcgactggatcttcatccacccggagcaggaggagagc
gacgctctctccgacacggctgacacgcagactaatgacaacgccttctccaacggcaac
aacacgcacagcgacgccacgctctctccagacagagacgcgtcgggcccgcgggtcaaa
gacggcccgggacgttacgagctctttgctttcatcagtcacatgggatcatccacaatg
tctggacattatgtttgtcacatcaaaaaggaagggaggtgggtgatctacaacgaccac
aaagtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcga
ctgtctagcagttaa
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