Pungitius pungitius (ninespine stickleback): 119221819
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Entry
119221819 CDS
T07626
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119221819 (ddx4)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119221819 (ddx4)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119221819 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
119221819
NCBI-ProteinID:
XP_037333818
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MDEWDEAETTASTIAATSDGHSGRGRGFKNSFSGDKETMNDGNNWNSRAGESSGSRGRGR
SRMDHNDSNDNSGVHENGFRGGRVGGRGGGDCFRRGGDQGARGAFGGGYRGRDEEILTHG
GADDSEKRDETDGERPKVTYVPPTLPEDEDSIFAHYEKGINFDKYDDILVDVSGTNPPQA
IMTFEEAALCESLRRNVNKSGYLKPTPVQKHGIPIISAGRDIMACAQTGSGKTAAFLLPI
LQQLMVDGVAASSFSEQQEPEAIIVAPTRELIHQIYLEARKFAFGTCVRPVVVYGGVSTG
YQIRDLLKGCNVLCGTPGRLMDVIGRGKVGLTKLRYLVLDEADRMLDMGFEPEMRRLVGS
PGMPSKENRQTLMFSATYPEDIQRMAADFLKTDYLFLAVGVVGGACSDVEQTFIQVTKFS
KREQLLDLLKTTGTERTMVFVETKRQADFIATYLCQEKVLTTSIHGDREQREREQALADF
RCGKCSVLVATSVAARGLDIPDVQHVVNFDLPNNIDEYVHRIGRTGRCGNTGRAVSFYDP
CADGQLARSLVTILSKAQQEVPSWLEESAFSGTGTGGFNPPRGSFASTDSRKGGSFKDTA
VRSQPAAQAADDDDDDAWE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtgggatgaagcggaaaccactgctagtaccattgcagcaaccagtgacggt
catagtggaagaggcagaggatttaaaaactcattctcaggtgataaagagactatgaat
gatgggaacaactggaacagtagagccggagaaagcagtggttccagaggcagagggcgc
agcaggatggatcacaatgactccaacgataacagtggagttcatgaaaacgggtttaga
ggaggaagagtgggtggaagaggaggaggggactgtttcagaagaggtggcgaccaaggt
gctagaggagcctttggaggaggctaccgtgggagagatgaggagatcttaactcatggg
ggagctgacgattcagaaaagagggatgaaacggatggtgaaagaccaaaggtcacctat
gtccccccaacgctgcctgaagatgaagactcaatctttgcgcactatgagaaaggcatc
aactttgacaagtatgacgacattctggtggacgtcagtggaaccaacccaccgcaggct
atcatgacttttgaagaggcagcgttgtgtgagtccttaagaagaaatgtcaacaagtct
ggttacctgaagccgaccccagtgcagaaacatggcatcccaatcatctctgctggcaga
gacatcatggcttgtgcacagactgggtctggtaaaacggctgccttcctcctccctatt
ttgcagcagctaatggttgatggtgtggcggccagctctttcagtgagcagcaggagcct
gaagccatcattgtggccccaacaagggagcttatccaccaaatctatctggaggccagg
aagtttgcctttggaacatgtgtgcgcccagtagtggtctatggtggagtcagcactggg
taccaaataagagacctcttaaaggggtgcaatgtactgtgtggaacgccgggtagactg
atggatgtaataggaagaggaaaggtcggactgactaagctgcggtacttggtgctggac
gaggccgaccggatgttggatatgggctttgagcctgaaatgcgtcgcttggtgggctcc
cctggaatgccgtccaaagagaataggcagactctgatgttcagtgccacctacccggag
gacatccaaaggatggcggctgacttcctcaagacagattatttgttcttggctgtgggt
gtggtgggcggcgcatgcagcgacgtggagcaaacgtttatccaagtcacaaagttctca
aagagagaacaactccttgaccttcttaagaccacagggactgagcgcacgatggtcttt
gtggagaccaagagacaagcggatttcattgccacttacttatgccaggagaaggtcctg
accaccagcatccatggggaccgtgagcagagagagagagagcaggctctggcagacttc
cgctgtggcaaatgttccgtcctggtggcaacctcagtcgcagcccgtggcttggacatt
ccagatgtgcagcatgtggtgaactttgatctcccaaacaacattgatgaatacgtccac
cgcattgggagaactggccgctgtgggaatactgggagggcggtgtcattctatgatcct
tgtgctgacggccagttggcccgctcccttgtcacaatcctgtccaaagcccagcaggaa
gtgccctcctggctagaggagtctgccttcagtggcactggaactggtggcttcaatccc
cccagggggagctttgcctccactgactccaggaagggaggatctttcaaggacacggct
gtgcgcagccagcctgctgctcaggctgcagatgatgatgatgatgatgcctgggagtaa
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