Pungitius pungitius (ninespine stickleback): 119224711
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Entry
119224711 CDS
T07626
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119224711 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119224711 (usp47)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119224711 (usp47)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119224711 (usp47)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119224711 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119224711
NCBI-ProteinID:
XP_037337850
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MEMVPNEENQFVPQEIQNAAEEPRVLCIIQDITSAKTINERLTLNLPASTSLSKLYDDVA
HKARYVKDTFDLAWRNAPDMAPLDHSSEVTLSDSGFEPGGKKNFLQLTDKDGEQPQMASD
ESGTADSSGLDDSSQERFIGPLPRDSAAGSSGDYSSPSYSYSSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEETEEDPVTSIPHQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERALKPKSLPIFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLAGEEFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLQEATEMAYKMMELEGVASLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLESRKPEQVFQPYKPGEVMVKVHVVDLKKETIASPISVRAYLN
QTISEFKQLIAQATALSSESMRVVLERCYNDLRLLYVPSKTLKAEGFFRSNKVFVESSES
ADHQVAFTESLLWKLLDRHGNTIRLLVLLPEQSPGSLANRTLGQKVVGDSDVPVEGAKAN
GKSVEAILEESTEKLKNLSLQQQQASSTSDSQKSSDASDIEPIESPTREADSSLCVAADN
RELENRIGATAGGSSGTSSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCN
ADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQYLY
FKAEPCSQDDSSSNAQKCLIVHVDKRITLAAFKLNLEPYVGVTATQFKVFRVYANNQEFE
SVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEAEPCKFLVDTVFAKGMTVR
QSKVELLPQMKEQCKLDLDIDSVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLEIL
NEPEKMKSMSQLAVLTRRWSPATMKLGPFQEVILESSSVEELKEKLSEISNIPLENLDFA
KGRGTFPCDISVLEIHQDLDWNPKVLTLNVWPLYICDDGAVVFYRDSTEDPMDLSDEERS
ELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctaacgaggagaaccagttcgtaccccaagagatccaaaatgcagcg
gaagagcccagagtgctctgtatcatccaggacatcaccagtgcaaagacgatcaatgag
aggctgaccctcaacctgcctgcttccacctcgctctccaaactctatgacgatgtcgcc
cacaaagcgagatacgtgaaagacacttttgaccttgcctggagaaatgcacctgacatg
gcgccactagaccacagcagtgaggtgaccctctcagattctggttttgagcctggtggt
aagaaaaatttcctccagctcacagataaagatggagagcagccccagatggcatcggat
gagtcaggaacagcagatagcagtggactcgatgacagctctcaagagcggtttattggg
ccactgcctagagacagtgctgcaggcagcagtggtgactacagtagtccatcctactcc
tactcgtccatcctcaacaaatctgaaaccggttacgtgggcttggtcaaccaagcgatg
acctgctatctgaacagtcttctacaaacgctgttcatgaccccagagttcagaaatgca
ctttacaactgggagtttgaggagactgaagaggatccagtcactagtataccacaccag
ttgcaaaggctgtttgttctgctgcagactagtaagaaacgggcaatcgagaccactgat
gtgacacggagcttcggctgggacagcagcgaagcttggcagcagcatgacgtccaggag
ctgtgcagggtcatgtttgatgccctggagcagaagtggaagcagacggagcaggctgac
ttgatcaaccagctgtaccaagggaagctgaaggattatgtccgttgtctggagtgtggc
tatgagagctggaggattgatacttacctggacattcctcttgtaatcagaccctttgga
gccagccaggcctacggcagtgtggaagaggctttgcaggcattcatccaaccagaaact
cttgatgggcccaaccagtacttctgtgaacgctgcaaaaagaaatgtgacgcccgcaag
ggtctgagatttctgcacttcccctacctgctgacactgcagctgaaacggtttgatttt
gactacaccaccatgcatcgcatcaagcttaatgaccgaatgactttcccagaggagctg
gatatgagtccattcatcgacgtggaagatgagaagtcccctcagacagagagctgcact
gacagcggagcagagaatgaaggcagttgccacagcgaccagatgagcaacgatttttcc
accgatgattgtgtagatgaaggcatctgcttggacagcactggcagcacagagagggca
ttgaagccaaagagcttgccaatctttgagctgttctccgtcatggtacattctgggagc
gctgcaggtggtcactactacgcctgcatcaaatccttcagtgatggccagtggtacagc
ttcaacgatcagcacgttagcaagatcacccaagatgatatcaggaagacgtacggggga
tcctcaggcagcagaggctactattccagtgcctttgcgagctctacaaatgcatatatg
ctgatttatagattgaaggatccctcaaggaatgcaaagtatttggccggggaagagttc
ccagagcacataaagagtttggttcagaaggagaaagagtctgaagagcaggaaaagaga
cagcgggagattgagcgcaacacttgcaagataaagcttttctgcatgcatcctgtaaag
atgatgatggagagcaagctggaagtacacaaagacaaaactcttcaagaagcaacagaa
atggcctacaagatgatggagcttgagggagtggcgtctctggactgctgccgcttggtg
aagtacgatgagtttcacgagtacctggagcgctcctatgagggtgaggaggacacgccg
atgggtctgctgcttggaggggtcaagtcctcgtacatgttcgacctgctgcttgagagc
cgcaaaccggagcaggtgttccagccctacaaacctggagaggtgatggtgaaggttcat
gttgtggatctgaagaaggagaccatcgccagtccaatcagtgttcgggcgtacttgaac
caaacgatatctgaattcaaacagcttattgcacaggctacagcgctttcttcagaaagc
atgcgtgtggtcctggagcgctgctataatgacctccggctcctgtatgttcccagcaag
accctgaaagctgaggggttcttcaggagtaacaaggtctttgtggagagctccgagtcg
gctgatcatcaagttgctttcactgaatcgctcttgtggaaactgttggatcgtcacggc
aatacgatccgcctcttggtcttactccccgaacagtctcctggctccttggccaacagg
actcttggccaaaaagtagtaggtgactcggatgtgcccgtagagggcgcaaaggctaac
ggcaaatctgtagaggcgatccttgaggaaagcacagaaaagttaaagaatctgtctctg
caacagcagcaggcctccagcactagtgacagccagaaaagctctgacgccagcgacatt
gaacccatcgaatccccgacccgagaggccgactcttccctctgtgtggctgcagacaac
agagagttagagaaccggatcggagccacagccgggggcagcagcggcacctcatccgac
cccgagaaccactttgcctgcgaggagcgctcggactctgaggtgaacaacgaccgtagc
accagctcagtggacagcgacatcctaagctccagtcacagtagtgacaccctgtgcaat
gcagacagcggtcccatacagctggctaacggcttggactcgcacagcatcacgagtagc
cgccgctcaaaagcccacgaggggaaaaaggagacctgggacactgctgaagaggactct
gggacagacagcgagtacgacgacaatgggaagagcaaggcagaggcccagtacctgtac
ttcaaagcagagccttgttctcaagatgactcctcatcaaacgcacaaaaatgtttaatc
gttcacgtggacaagagaataactctagcagcatttaaactgaacctggagccgtatgtg
ggagtcaccgctacccagttcaaggtgtttcgtgtatacgccaacaaccaggagtttgag
agcgtccggctcaatgaaacgctctcatcattctccgacgataacaagataacaattcga
ttgggaagagcactgaaaaagggtgaatacagagtgaaggtgtatcaactgctagtgaat
gaagcagagccctgcaagttcctcgtggacacggtgtttgccaagggcatgaccgtcaga
cagtcgaaagtggagctgctccctcagatgaaagagcagtgcaagctcgacctcgacatt
gacagtgttcgactcaggaaaaagacgtggaagaacccaggcacggtgtttctggattat
catgtctatgaagaagacatcagcatctcctccaactgggaagttttcctggaaattctc
aacgaaccggagaagatgaagtccatgtcgcagctggctgtcctcacccggagatggagc
cccgctacaatgaagcttggtcccttccaggaagttattctggagagcagcagcgtagaa
gaactcaaggagaagcttagcgaaatcagcaatattcctctcgaaaacctggactttgca
aaggggagaggaacatttccttgtgatatttctgtgttggagatccatcaggatttggac
tggaaccctaaggtgttgacccttaacgtgtggcctctgtacatctgtgacgacggagct
gtggtattctacagggacagcacggaggacccgatggacctgtcggacgaggagcgcagt
gagctgatgaagaaggagagcagccgtctgcttaagaccggacaccgtgtcagctactcg
ccgcgcaaggagaaggccctcaagatctacctggacggaggcccggccaaggacccgggg
caggactga
DBGET
integrated database retrieval system
