Pseudomonas putida HB3267: B479_18200
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Entry
B479_18200 CDS
T02389
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh03030
DNA replication
ppuh03430
Mismatch repair
ppuh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B479_18200
03430 Mismatch repair
B479_18200
03440 Homologous recombination
B479_18200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppuh03032
]
B479_18200
03400 DNA repair and recombination proteins [BR:
ppuh03400
]
B479_18200
Enzymes [BR:
ppuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B479_18200
DNA replication proteins [BR:
ppuh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B479_18200
DNA repair and recombination proteins [BR:
ppuh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B479_18200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
TIP49
AAA_30
AAA_19
AAA_16
PIF1
AAA_18
AAA_2
TsaE
nSTAND3
AAA_7
HasA
SKI
Rad17
Herpes_Helicase
zf-CXXC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AGA74532
LinkDB
All DBs
Position
complement(4014695..4016767)
Genome browser
AA seq
690 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLAAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWAGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPMGISQATADPATPVAAPAVAVAPPAAAVVAPVAPVAEQQVQAPAPVE
PAPQPVVEPVVAAEPAPVSEPEPAPEPVAEVVDLPWEEPAPTPAPVVAEPAPAPAPAAAP
TPAPAAPAHDDEPPFDPSAYAAVGMDRDDEPPLDEDYYGGESDPVGFSYLDELAEHVQEE
APKPAAEPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAVDGDDWLLHLDPGQ
GALFNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVTSIEQD
PLIQQMIKLFGAKVRQDTIEPVEALVNQGQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggccttgatcaatgccttggacaaccagcgcctgcaccatgcc
tatctgttcactggtacccggggtgtgggcaagaccaccattgcccgtatcatcgccaag
tgcctgaactgcgaaaccggcatcacctccacgccctgcggcacctgctcggtgtgccgg
gagatcgacgaaggccgtttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaggacacccgcgaactgctcgataacgtgcagtacgcgccgagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgactcactcgttcaacgccttgctc
aagacgctggaagagccaccgccctacgtcaagttcatcctcgccaccactgacccgcag
aaactgccggccaccatcctgtcgcgctgcctgcagttctcgctgaagaacatgagcccg
gagcgggtggtcgagcacctcagccatgttctggccgccgagaacgtgccgttcgagccg
gatgccctgtggctgctggggcgcgcggccgatggttcgatgcgcgacgccatgagcctg
accgaccaggccatcgcctttggcgaaggcaaggtgctggccgccgatgtgcgggccatg
ctcggcagccttgatcatggccaagtctacggggtgctgcaggcgctgctcgaaggcgat
gcccgggccttgctcgaggccgtgcgcaacctggccgagcaggggccggactgggctggc
gtgctggccgagatgctcaatgtgctgcaccgcgtggccattgcccaggcgctgccggaa
gcggtggacaacggccagggcgaccgtgagcgggtgctggcactggcctcggcattgcca
gccgaggacgtgcagttctattaccagatgggcctgatcggccgccgtgacctgccactt
gcgccggacccgcgcggcggtttcgaaatggtcctgctgcgcatgctggcgttccgcccc
gccgacaccgacgacgcgccgaagccggtactaaagccaatggggatcagccaggccaca
gctgatcctgcaacaccggtggcagcgccggcggttgccgtggcgccgccggccgctgct
gtcgtggcgccggttgcaccggttgccgagcaacaagtgcaggcgcccgcaccggtcgaa
ccagcgccacagccggttgtcgagcctgtggtggcagctgagcctgccccggtcagtgaa
cctgagccagcaccagaacccgtggcagaggtggttgacctgccatgggaagagcctgcg
ccaacgcccgcaccggtagtggccgagcctgcgccggctcctgcaccggccgctgcgccc
acgccggcacctgccgccccggcgcacgacgacgagccacccttcgacccgtccgcctat
gccgccgtgggcatggatcgcgacgacgaaccgcccctggacgaggactattacggcggc
gaaagcgacccggtcggcttcagctacctggacgaactggccgaacacgtccaggaagaa
gcacccaagccggcagccgaaccgctgcccgcagccaagccggccaccggcctggccctg
caatggctggaattattcccacagttgcctgtatccgggatgacaggcaacatcgcggca
aactgtacgttgattgccgtcgatggcgacgactggctgctgcacctggaccctggccag
ggggcgctgttcaacgccacccagcaacggcgccttaacgaagcgctcaaccagcacctg
gggcgcacgctgaacctgcgcatcgagttgatcctgcccgagcaggaaaccccggcccag
gcggcggcgcgcaaacgcgccgagcgccagcaggacgcagtcacctcgatcgagcaggat
ccgttgatccagcagatgatcaagttgttcggcgccaaggtgcggcaggatactattgag
cctgtagaagccctggttaatcagggccagtaa
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