KEGG   Pseudomonas putida HB3267: B479_20810
Entry
B479_20810        CDS       T02389                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppuh  Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:ppuh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppuh03400]
    B479_20810
Enzymes [BR:ppuh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B479_20810
    5.6.2.6  RNA 3'-5' helicase
     B479_20810
DNA repair and recombination proteins [BR:ppuh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    B479_20810
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AGA75052
LinkDB
Position
4578477..4580930
AA seq 817 aa
MPAATDLAKAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFKA
EAQGRHAAPLQVVWVTPMRALAADTARALQMPLDDLGLPWSVGIRSGDTGSAERARQARR
LPSVLVTTPESLTLLLTRAQAREDFATLRLVVVDEWHELLGNKRGVQLQLALARLRHWHP
SLPTWGLSATLGNLQHALDVLLPQGGLLVQGRQDKQLQVDTLLPTAIERFPWAGHMGLKM
LDQVSREIDASTSCLVFTNTRAQAELWYQALLEVRPEWAGLIALHHASLARDTRDWVERS
LKQGNLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLVQRAGRSGHAPGRRSRVTLVP
THSLELVEAAAARHALAAGHIEARHSPRLCMDVLVQHLVSMALGSGFHPQQLLAEVRSTW
AFSELRDSQWQWALDFVCHGGSSLSAYPDYQRVERQPDGTYKVASERLARRHRMSIGTIV
SDASLQLKYWSKGGGGKALGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRRSTA
RKAAVARWNGGRMPLSSELADALVEQLGAASQGRFQSPEMRAVRPLLALQAQWSALPTPE
TLLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRVQPLSVSIAVNDYGFELLSPG
KVDWTTHLPQALGTEHLLDDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSLRQIQ
ASSGLFYEVFRKHDTGNLLLAQARDEVLNEELEIERLHRQLLKMGQLQLELRPLKRPGPL
AFALLVEGMRETLSTERLADRIARMVAELNSAADATE
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgcccgccgccaccgacctcgccaaggcctggttcgccaagcgtggctggaagcctttc
gctttccagcgccgcgtctgggccgccgtggaacggggcgaatccggcttgctgcatgcc
agtaccggtgccggcaagacctacgcggtatggctcgccgcactgagggccttcaaggcc
gaagcccaaggacgtcatgctgcacccttgcaggtggtgtgggttacccccatgcgagcc
ttggccgccgacaccgcccgcgcactgcagatgccgctggacgacctgggcctgccctgg
agcgtgggcattcgcagcggcgacaccggcagtgccgaacgtgcccggcaagcacggcgc
ctgcccagcgtactggtcactacccctgaaagccttacgctgctgttgacccgggcacaa
gctcgcgaagacttcgccacactgcgcctggtagtggtggacgaatggcacgaactactg
ggcaacaagcgtggagtacaactgcaactggctttggcccgcctgcgccactggcacccg
agcctgccgacctggggcctgtccgcgaccctcggcaatctccaacatgcgctggacgta
ttgctgccacaaggcggcctgctggtacaaggccgacaggacaagcagttgcaggtcgat
accctgctgccaacggccatcgagcgcttcccctgggccgggcacatgggtttgaagatg
ctcgatcaggtcagccgggagatcgatgccagcactagttgccttgtcttcaccaacact
cgggcgcaggccgaactctggtaccaggccctgctcgaggtacgccccgagtgggccggg
ctgattgccttgcaccatgcctcactggcccgcgatacccgtgactgggtcgagcgcagc
ctcaagcaaggcaacctgaaggcagtgatctgcacctccagcctggacctgggggtggac
ttcctgcccgtggagcgagtactgcagatcggttccgccaagggcattgcccgcctcgtg
caacgggccgggcgctccggccatgcgccggggcggcgctcccgggtgactctggtgccc
acccacagcctggaactggtggaagcagccgccgccaggcacgccctggcagccgggcac
atcgaagcccggcattcgccgcgcttgtgcatggacgtgctggtgcaacacttggtaagc
atggctttgggcagcggctttcacccgcagcagttgctggccgaagtgcgcagtacctgg
gccttcagcgaattgcgtgacagccagtggcaatgggcgctggacttcgtctgccatggc
ggcagctcactcagcgcctacccagactaccagcgcgtcgagcgccagcccgacggcact
tacaaggttgccagcgaacgtttggcacgtcgccaccgcatgagtatcggtaccatcgtc
agcgacgccagcctgcagctcaagtactggagcaagggtggtgggggcaaggcgctgggc
agcgtcgaagaggcgttcattgcccgtttgcgccctggcgacaccttggtgttcgccggg
cgagtgctggaactggtgcgcgtggaaaacatgacggcctacgtacgccgcagtaccgcg
cgcaaggcagcggttgcacgctggaatggtggccgcatgccgctctccagcgaactggcc
gacgcactggtcgagcagctcggcgcagcatcccaagggcgctttcaaagcccggagatg
cgtgcagtacgccccctgctggccttgcaggcgcaatggtcggcgctgcccacccccgaa
acgctgctggcagaaaccttcaagtcgcgccagggttggcacctgttcctgtatccgttc
gccgggcgcatggccaaccttggactggccaacctgatcgcctggcgggtgagccgcgtg
cagccgctttcggtttcgattgcggtcaatgactacggtttcgaactgctcagtccaggc
aaggtggactggacgacgcacctgccgcaggcacttggtaccgaacacctgctggatgat
gtgctggccagcctcaacgcaggagaaatggcgttgcgtcgttttcgcgagatcgcacag
attgccgggttggtgtttggcgggtatccggcggcgcagaaaagcctcaggcagatccag
gcctccagcggcttgttctatgaggtatttcgcaagcatgacaccggcaacctgctgctg
gcccaggcacgggacgaggtgctgaatgaggaactggagatcgagcggttgcaccggcaa
ttgctgaagatgggccagttacagctggaactgcgaccactcaaacggcccggaccgttg
gcatttgccttgctggtggaaggcatgcgcgaaacgttgagcaccgagagactggcggac
cggattgcgaggatggtcgcggagctgaacagtgcggcggacgctacggaatga

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