Pectobacterium punjabense: E2566_07245
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Entry
E2566_07245 CDS
T06530
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj00521
Streptomycin biosynthesis
ppuj00523
Polyketide sugar unit biosynthesis
ppuj00541
O-Antigen nucleotide sugar biosynthesis
ppuj01100
Metabolic pathways
ppuj01110
Biosynthesis of secondary metabolites
ppuj01250
Biosynthesis of nucleotide sugars
Module
ppuj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E2566_07245 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E2566_07245 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E2566_07245 (rfbC)
Enzymes [BR:
ppuj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E2566_07245 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
QJA19733
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All DBs
Position
complement(1601193..1601729)
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AA seq
178 aa
AA seq
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MQIIDTAVYGAKIIQPKVFGDARGFFLETFEKKRYQKMLDIDLDFVQDNHSRSSKGVLRG
LHFQKTNPQGKLVRVVRGEVFDVAVDIRQDSPTYGKWYGIVLSEENKTQFWLPPGLAHGF
VVLSDTADFEYKCTDYYDPSDEGCLLWNDPEVGIEWPISDPLLSEKDKLGQLFKDLGK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcattgataccgctgtttacggcgcaaaaattattcaaccgaaagtatttggt
gacgccagaggcttcttccttgaaacatttgagaagaagcgctaccaaaagatgttggat
atcgatttagactttgttcaggataaccattcccgttcaagcaaaggcgtattacgcggc
ttacatttccaaaaaacgaatccacagggaaaactggttcgcgttgtacgcggggaagtt
tttgatgttgcagtagatattcgtcaggattccccaacatatggtaaatggtatgggata
gtgctatctgaagagaacaaaacccaattctggctcccaccggggctggcacatggtttt
gtcgttctctcagataccgcagatttcgagtacaagtgtacagattattatgatcccagc
gatgaaggatgcctgttatggaacgatcctgaagttggcattgaatggccaatatccgat
ccattgctttctgagaaagataagctaggccaattattcaaggatctgggaaaatga
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