Pseudomonas putida NBRC 14164: PP4_39930
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Entry
PP4_39930 CDS
T02707
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00521
Streptomycin biosynthesis
ppun00523
Polyketide sugar unit biosynthesis
ppun00541
O-Antigen nucleotide sugar biosynthesis
ppun01100
Metabolic pathways
ppun01110
Biosynthesis of secondary metabolites
ppun01250
Biosynthesis of nucleotide sugars
Module
ppun_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PP4_39930 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PP4_39930 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PP4_39930 (rmlC)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PP4_39930 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
BAN55846
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Position
complement(4541556..4542527)
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AA seq
323 aa
AA seq
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MKLVQTNIPDVVIVEPAVYEDDRGWFTETFNETRFHGALLELGLSKPRAFVQDNHSMSHR
GVLRGLHFQRSPNAQGKLVRVVRGAAYDVAVDIRPGSPTFGQWVGVELTEHNNRMLWIPE
GFAHGFIALEDETHFLYKTTDVYNKDAEGSIHWDDPDLAIEWPMRDGLIVSEKDNQAPSF
RHHLNVAEEGALAQTELFKVLGDHRGQLVALQALDNVPFAIQRVYYLTETLPGVSRGFHA
HKALNQLAICVSGRCRMVMDDGTTRTDHWLDAFNKGILIPPMVWHEMHDFSPDCVLLVLA
DAHYDEADYIRDYTSFTELKRNA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttcaaacgaacattcccgatgtagtcatagtcgagcccgccgtgtacgag
gatgatcgcgggtggttcacggaaaccttcaatgaaacacgctttcatggcgcattgctt
gagctgggcttgagcaagccccgtgcgttcgtccaggacaaccactcgatgtctcatcgc
ggtgtgctgcgcgggctgcacttccagcgttcgccgaatgcccagggcaagctggtgagg
gtagtgcgtggtgcggcctatgacgtggcggtcgatatccgccctggctctccgacgttc
gggcagtgggtaggtgttgagctgaccgaacacaataaccgcatgctgtggattcccgaa
gggttcgcgcacgggtttatcgccctcgaggacgaaacacattttctgtacaagaccacg
gatgtgtacaacaaggatgccgaaggcagtatccattgggatgaccccgacctggcgatt
gaatggccaatgcgcgacggcctcattgtcagcgagaaggataaccaggccccgtcgttc
cgccaccacctgaacgttgcagaggaaggggcgcttgcccagactgagctgttcaaggtg
ctgggtgatcatcgtggccagttggtagccctgcaagccttggataatgtaccgttcgcc
atacagcgcgtgtattacctgaccgaaacgctgccaggggtttcccgtggcttccacgcc
cacaaggcactcaatcagctggcaatctgcgtgtcagggcgttgccggatggtcatggat
gatggcaccacccgcacagaccattggctggacgcgttcaacaagggcatcctgattccg
cccatggtctggcacgaaatgcatgatttcagcccggactgcgtgctgctggtactggcc
gacgcccattacgacgaggccgactacattcgtgactacacctcgttcacggagctgaag
cgcaatgcctag
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