Pseudomonas sp. UW4: PputUW4_00146
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Entry
PputUW4_00146 CDS
T02357
Symbol
gabD1
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00250
Alanine, aspartate and glutamate metabolism
ppuu00310
Lysine degradation
ppuu00350
Tyrosine metabolism
ppuu00650
Butanoate metabolism
ppuu00760
Nicotinate and nicotinamide metabolism
ppuu01100
Metabolic pathways
ppuu01120
Microbial metabolism in diverse environments
Module
ppuu_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PputUW4_00146 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PputUW4_00146 (gabD1)
00310 Lysine degradation
PputUW4_00146 (gabD1)
00350 Tyrosine metabolism
PputUW4_00146 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PputUW4_00146 (gabD1)
Enzymes [BR:
ppuu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PputUW4_00146 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PputUW4_00146 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PputUW4_00146 (gabD1)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFY17354
UniProt:
K9NC56
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All DBs
Position
164045..165487
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWYELIIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPAGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKAAVAKLKIGNGLEAGTTTGPLIDEKAVAKVQEHIADAVSKGATVLSGGKS
MEGNFFEPTILTNVPNNAAVAKEETFGPLAPLFRFKDEADVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcgtgggtt
gatgcggacaatggtcagacgatcaaggtcaacaacccggcaacgggcgaaattctgggc
actgtgccgaaaatgggcgctgccgaaacccgccgtgcgatcgaagctgctgacaaagcg
ctgccggcctggcgtgccctgaccgccaaagagcgtgcaggcaaactgcgtcgctggtat
gaactgatcatcgagaaccaggacgacctggctcgcctgatgaccctggaacagggcaag
ccattggccgaagccaagggcgaaatcgtttacgccgcgtccttcatcgaatggttcgcc
gaagaagccaagcgcatctacggtgacgtgattccgggccaccagccagacaagcgcctg
atcgtgatcaagcagccaatcggcgtgaccgctgcaatcaccccgtggaacttcccggct
gccatgatcacccgtaaagccggcccggccctggccgccggttgtaccatggtgctcaag
cctgcttcgcaaactccgttctccgcctttgccctggctgaactggcccagcgtgccggt
atccctgcaggcgtgttcagcgtggtttccggcagcgccggcgacatcggcagcgaactg
accagcaacccgatcgtgcgcaagctgtccttcaccggttcgaccgaaatcggtcgtcaa
ctgatgtcggaatgcgccaaggacatcaagaaagtgtccttggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgaaggcgcgatcatctcc
aagtaccgcaacaacggtcagacctgcgtctgcgccaaccgcctgtacattcaggattcg
gtctacgacgcattcgccgaaaagctgaaagccgctgtggccaagctcaagatcggtaac
ggtctggaagcaggcaccaccactggcccgctgatcgacgaaaaagccgtggccaaggtg
caagagcacattgctgacgccgtttccaaaggcgccaccgtgctgtccggcggcaagtcg
atggaaggtaacttcttcgaaccgaccatcctgaccaacgtgccgaacaacgctgccgtg
gccaaggaagaaaccttcggtccattggctccactattccgcttcaaagacgaagccgat
gtgatcgcgatgtccaacgacaccgagttcggtctggcctcgtacttctatgctcgcgac
ctgggccgtgtgttccgtgtggctgaagccctggaatacggcatggtcggcgttaacacc
gggttgatctccaacgaagtcgcgccgttcggcggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacggcatcgaagattacctggaaatcaaatacctctgcctgggcatc
taa
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