Pseudomonas sp. UW4: PputUW4_01821
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Entry
PputUW4_01821 CDS
T02357
Symbol
icd1
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00020
Citrate cycle (TCA cycle)
ppuu00480
Glutathione metabolism
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
ppuu01120
Microbial metabolism in diverse environments
ppuu01200
Carbon metabolism
ppuu01210
2-Oxocarboxylic acid metabolism
ppuu01230
Biosynthesis of amino acids
Module
ppuu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppuu_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PputUW4_01821 (icd1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PputUW4_01821 (icd1)
Enzymes [BR:
ppuu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PputUW4_01821 (icd1)
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
AFY19026
UniProt:
K9NG18
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All DBs
Position
complement(2148196..2150421)
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAGRILASFPEQLGDK
AVADHLAELGALAVTPEANIIKLPNISASVPQLQAAIKELQAQGYNLPDYPETVTCDADK
EAKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAKDSKSHVAHMSTGD
FYGSEKAALIDAADAVKIELIAQDGTATVLKEKTSVQAGEILDCAVMSKNALRSFIAAEI
EDAKAQGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALAKHADVLAQIGFNLNNGIGDL
YARIKALPAEQQAAIEADIQAVYAARPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKANGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKADGVVRVTDSKGNLLLEQSVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
STPAIFWLDPMRAHDGVVIEKVQAYLKDHDTTGLDIQIMSPVDAMKFTLQRTREGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGVTYNNPKALVLAKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLALYWAQALAAQTEDAALQAQFATLAKTLTENEATIVAELNAVQGKPVDIGGYYHADA
ELISKAMRPSATFNAAVAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagctcctgccctcgccacc
tattcactgttgcctatcgtagaggcgttcaccgcctcggctgatatcgccgttgaaacc
cgcgatatctctcttgcagggcgcatcctggccagcttccccgagcaactgggtgacaaa
gccgtagccgaccacctcgccgaactgggcgccctggccgttacgcctgaagccaacatc
atcaagctgccgaacatcagtgcttcggttccacaactgcaagccgcgatcaaagagctg
caagcccagggctacaacctgccggactacccggaaaccgtgacctgcgacgccgacaaa
gaagccaaggcgcgctacgacaaggtcaagggcagcgccgtgaacccggttctgcgtgaa
ggcaactccgaccgccgcgctccgctgtcggtcaagaactacgcgcgcaagcacccgcac
aaaatgggcgcctgggccaaggactccaagtcccacgtcgcgcacatgagcaccggcgat
ttctacggcagcgaaaaagccgccctgatcgacgccgctgacgccgtgaaaatcgaactg
atcgcgcaagacggcaccgccaccgtcctgaaagaaaagaccagcgtacaagccggtgag
atcctcgattgcgcggtcatgagcaaaaacgccctgcgcagcttcatcgccgccgaaatc
gaagatgccaaggcacaaggcgtgctgctgtcggtccacctgaaagccaccatgatgaag
gtttccgacccgatcatgttcggccagatcgttgccgagttctataaagatgcactggcc
aagcacgctgacgtgctggcacagatcggcttcaacctgaacaacggcatcggcgacctg
tacgctcgcatcaaggccctgcctgccgaacagcaagcggccatcgaagctgacatccag
gcggtctacgccgctcgcccttccctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgtcatcgtcgacgcctcgatgccggcgatgatccgtgactcc
ggcaagatgtggggcaccgacggccagctgcacgacaccaaggccgtgatcccggatcgt
tgctacgcaaccatctaccaggccgtgatcgaagattgcaaagccaacggcgcattcgat
ccgaccaccatgggcagcgtaccgaacgttggcctgatggcgaagaaagccgaagaatac
ggctcccatgacaagaccttccagatcaaggctgacggcgttgttcgcgtcaccgacagc
aagggcaacctgctgctggagcagtcggtcgaagccggcgacatcttccgcatgtgccag
accaaagatgcaccgatccaggactgggtcaaactggcagtcaaccgtgctcgcgccagc
agtactccggcgattttctggctggacccaatgcgcgcccacgacggcgtggtgatcgag
aaagttcaggcttacctgaaggatcacgacaccaccggcctggacatccagatcatgtcg
cctgtcgacgccatgaagttcaccctgcagcgcacccgcgaaggtaaagacaccatctcg
gtgaccggcaacgtactgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaaacc
ggcgccggcggttcggctccgaagcacgttcagcaattgctggaagagaacttcctgcgc
tgggattcgctgggtgagttcctggccctggccgcgtccctggaacacctgggcgtgacc
tacaacaatccaaaggcgctggtactggccaagaccctggaccaggccaccggccagttc
ctggacaacaacaagtcgccatcgcgcaaagtcggcaacatcgacaaccgcggcagccac
ttctacctggcgttgtactgggctcaagccctggccgcccagaccgaagacgctgcactg
caagcgcagttcgcgaccctggccaaaaccctgaccgagaacgaagcgaccatcgttgcc
gaactcaacgccgttcagggcaagccagtggacatcggcggttactaccacgccgacgcc
gagctgatcagcaaggccatgcgcccaagcgcaaccttcaacgcggcggttgctgcgctg
gtttaa
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