Pseudomonas putida DOT-T1E: T1E_0096
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Entry
T1E_0096 CDS
T02181
Name
(GenBank) spermidine/putrescine-binding periplasmic
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T1E_0096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppx02000
]
T1E_0096
Transporters [BR:
ppx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T1E_0096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AFO45955
UniProt:
I7ATN3
LinkDB
All DBs
Position
110540..111583
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AA seq
347 aa
AA seq
DB search
MQLYPRVTGLCAALLALGLGTAQAAQQMVVVGYGGAGQKAQDEAIFKPFIAQDGSQLIQS
EYNGEMARIQVMADTGNVDWDVVQIEGPDLMRGCDEGIYEHLDWQRLGHAAELIPAAAQD
CGSAALVWSVAIAYDRSKLAQAPASWADFWGVDKYPGKRGLRKRAVYNLEFALLADGVKV
EDVYRVLSTPAGVERAFAKLSELKPHIQWWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQ
QGSPLAVVWPGSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGPTNTQA
AARLDPALANWVPTSPQNLQGALAMNVEFWVDHGEELEQRFNAWASK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcagctatatccacgtgtgaccggcctttgtgcagccttgctggcccttggcctgggc
actgcgcaagctgcgcagcagatggttgtggtcggttatggcggcgcgggccagaaggcc
caggatgaggcgattttcaagcccttcattgcccaggacggcagccagctgatccagagt
gaatacaacggtgaaatggcgcggatccaggtcatggcagacaccggcaacgtcgattgg
gatgtggtgcagatcgaaggccctgacttgatgcgcggctgcgacgaggggatctacgag
cacctggactggcagcgcctgggccatgccgccgaactgatcccggcagccgcacaggat
tgtgggtcggccgcgctggtctggagcgtggctattgcctacgaccgcagcaagctggcc
caggcgccggcgtcgtgggccgacttctggggcgtcgacaagtaccctggcaagcgcggc
ctgcgcaaacgtgcggtgtacaacctggaattcgcgctgttggctgacggggtcaaggtc
gaggacgtataccgggtattgtccacgccggcaggtgtcgagcgggccttcgccaaactc
agcgaactcaaaccccatatccagtggtgggacgccggcgctcaacccgcgcaatggctg
gcagccggtgacgtggtgatgacctccacctacagcggacgaattgcggtggcggcgcag
cagggcagcccgttggccgtggtatggcctggcagcctgtacggtatggactattgggcg
atcatcaaaggctcgcggcatgtcgaccaggccaagcggctgattgcctatgccaatcag
ccggatacccaggtgcggtatgtacaacagatcccctatgggccaaccaatacccaagcc
gcggccaggcttgacccggcgctggccaactgggtacccacttcgccacagaacctgcaa
ggggcgctggccatgaacgtggaattctgggtcgatcatggcgaagaactggagcaacgc
ttcaacgcctgggccagcaaatag
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