Pseudomonas putida DOT-T1E: T1E_4836
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Entry
T1E_4836 CDS
T02181
Name
(GenBank) sigma-54 dependent transcription regulator
Organism
ppx
Pseudomonas putida DOT-T1E
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
bpMoxR
AAA
AAA_2
AAA_22
AAA_19
AAA_7
Torsin
Motif
Other DBs
NCBI-ProteinID:
AFO50662
UniProt:
I7C2N2
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Position
complement(5282396..5283499)
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AA seq
367 aa
AA seq
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MQLLTLPPSPSLATSIRATAQVFEDARSQALLAHLQQVAPSEASVLIIGETGTGKELVAR
HIHNLSGRRNGPFVAVNCGAFSESLVEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLD
EIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYY
RLNVVSLQLYPLRERPGDILPLTRHFIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRE
LENVIHHTLLVCRNGLVQDDDLRLSHLRIERQDKSPVSTAESAEEQLLRAFQRLFEEQAG
SLHEKVEDTLLRSAYRFCHCNQVHTASLLGLSRNITRARLIAIGELVVNRRRPEPQMRPE
RAIQLSI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgaccctccccccttcgccgtcactggccacctcgatccgggcgaccgca
caggtcttcgaagacgctagatcgcaggcgctgctcgcccacctgcaacaggtcgccccc
agcgaggccagcgtcctgatcatcggcgagaccggcacgggcaaggagctggtcgcacgc
cacatacacaacctcagcggacggcgcaacggccccttcgtcgcggtgaactgtggcgcc
ttttcggagtcgctggtggaagccgagctgttcggccacgagaaaggcgccttcaccggc
gccctggcggccaaggccggctggttcgaggagggcaacggcggcacactgttcctcgac
gaaatcggcgacctgcccatggccatccaggtcaagctgttgcgcgtgctgcaagagcgt
gaagtggtgcgcctgggctcgcgcaagagcatccccatcgacgtgcgcgtggtcgccgcc
accaacgtgcaactggacaaggccatcgctgccggcaacttccgcgaagacctgtactac
cgcctcaacgtggtcagcctgcaactctacccgctgcgagaacgcccgggcgacatcctg
ccgctgacccgacacttcatcaagacctactgcaaccgcctgggttacggcgaagtgcgc
ctgtcccccgaggccgaacgcaagctggtgagctacgactggcccggcaacatccgcgag
ctggaaaacgtcatccaccacaccctgctggtgtgccgcaatggcctggtgcaggacgac
gacctgcgcctgtcgcacctgcgtatcgagcgccaggacaagtcgccggtgagcaccgcc
gaaagcgccgaagagcagttgctgcgtgcctttcagcgcctgttcgaggagcaggccggc
agcctgcacgagaaggtcgaggacaccctgctacgcagtgcctatcgtttctgccactgc
aaccaggtgcacacggccagcctgctgggtctgagccgcaacatcacccgcgcccgactg
atcgccatcggcgaactggtggtcaatcggcgccggccagagccccagatgcgccctgag
cgggcgatacaactatcaatctga
DBGET
integrated database retrieval system
