Photinus pyralis (common eastern firefly): 116169339
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Entry
116169339 CDS
T07438
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03022
Basal transcription factors
ppyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116169339
09124 Replication and repair
03420 Nucleotide excision repair
116169339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116169339
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116169339
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116169339
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116169339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Orthopox_C10L
Motif
Other DBs
NCBI-GeneID:
116169339
NCBI-ProteinID:
XP_031341273
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MADNGISSSNQINNSVLIQPTNLECKNLYDYLTTRPQNVLEKLYNRPTICLAVYRELPEL
ARQYVIRILFVEQPVPQAVVASWGHQAFSKEHVYVSKVLSNLYVWQEASIPGGLQGWILS
STFKHNLKIALLGGGKPWSMSSALDPDNKARDVAFLDGYSAERWECVLHYMVGSQQQEGI
SADAVRILLHAGLMKRDESDGSPVITRQGFQFLLLDRQAQVWHFVLQYLDTVEQRGLDLA
ECLTFLFQLSFSTLGKDYSTEGMSPRLLIFLQHLREFGLVYQRKRKAGRFYPTRLALNIT
SSQSKGTQVLEEDVPKGYIVVETNYRVYAYTDSNLQVALLGLFTDLLYRFPNVVVGILTR
DSIRQALRGGITAEQIIGYLTQHAHPQMLQSEVGSALPPTVIDQIKLWELERNRLVYSDG
VLYSQFLSQADFNVLREYAQSSGYLIWSNKEKRTMVVNKSGHDDVKKFWKRYSKGN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatggcatatcgagttcaaatcaaataaataactccgtgctcatacaacca
accaacttggaatgtaaaaatttatacgattatttaactaccagacctcaaaatgttctc
gaaaagctgtataatcgccctactatatgtttagcagtgtacagagaattgcctgagctg
gcacgccagtatgtgatacgtattctgtttgttgaacaaccggtaccccaagcagtcgta
gcgtcttggggacaccaagcgttttcaaaagagcatgtgtatgttagtaaagtgttaagt
aatctgtatgtatggcaggaagcctcaattcctggaggtttacaaggatggattttatca
tcaacttttaaacataatctaaaaatagcccttttggggggaggtaaaccatggagtatg
tcttctgccttagatcccgataataaggcgagagatgtcgcattcttagacggatattcc
gccgaacgatgggagtgcgtccttcattatatggtgggctctcaacagcaagaaggaata
tcggccgacgccgttcgtatcttattgcacgccggcctaatgaaacgggacgaaagcgac
ggcagtcctgtgattacgcgccaaggttttcaatttttattattagataggcaagcacaa
gtgtggcactttgtgctgcagtatctcgatacggtcgagcaacgaggcttagatctagca
gagtgtttgacttttctgtttcaacttagttttagtacactcggaaaggattatagcacg
gagggtatgagtcctagattattgatatttttacaacatttgcgtgaatttggattagtg
tatcaaagaaagcgcaaagcgggtcgtttttacccgacgagattagcattaaatataacc
agtagccaaagtaaaggaacgcaagtgttagaggaagacgttccgaaaggttacatagtc
gtcgaaacaaattacagggtctacgcttatacggattccaatctacaagtagcactttta
ggattatttacagatttattatatcgatttccaaatgtcgtagtcggaatattgactcgc
gactcaattaggcaagcactacgagggggaataactgccgaacaaattatcggatatctc
actcaacacgcacatcctcaaatgcttcagagcgaagtgggaagtgcgttacctcccacg
gtcatcgatcaaatcaagctgtgggagttagaacgaaatcgtctagtttattccgatgga
gttttgtatagccaatttttgtctcaggcggactttaatgtattacgtgaatatgctcaa
tcaagcggatatttaatttggagcaataaggagaagcgaacgatggttgtaaataaatca
ggccatgatgatgtaaaaaagttttggaagagatactcgaagggaaactag
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integrated database retrieval system
