Photinus pyralis (common eastern firefly): 116175834
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Entry
116175834 CDS
T07438
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03022
Basal transcription factors
ppyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116175834
09124 Replication and repair
03420 Nucleotide excision repair
116175834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyr03021
]
116175834
03400 DNA repair and recombination proteins [BR:
ppyr03400
]
116175834
Transcription machinery [BR:
ppyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116175834
DNA repair and recombination proteins [BR:
ppyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116175834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
116175834
NCBI-ProteinID:
XP_031350019
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MVDEEDPREYRWETGYEKTWEAIKEDEEGFLEASVADIVQRAKRKRQAQKQKNTKLGMMR
HLFLIVDCSESMSNQDLKPTRLYCTIKLLELFIEEFFDQNPISQLGIIIMQNKRADRISE
LSGNPRKHVKAIAGLNRTSLLGEPSLQNGLNMALKSLKLLPSHASREVLVIIGSLTTCDP
TDINVTIDAMKAEGVRCSIVGLAAEVHICKQLASETNGTYNVVLDDSHYKDLLFQHVEPP
PAAFCLESSLIKMGFPHQMVTEGTDEPLTMCMCHVDSVDEGSKLTTGGYYCPQCCSKYCE
LPVECRVCGLTLVSAPHLARSYHHLFPVGGYKEREFNNQVSSCYACQKVFGETEKQVYCC
LKCEKIFCIDCDIFIHDTLHTCPGCATNSSVLQHKAA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgaagaagatcctcgagagtacagatgggaaacaggctatgagaaaacttgg
gaagcaattaaggaagatgaggaagggtttctggaagcctcggttgccgatattgtccaa
cgagcgaaacgaaagcgccaagcacaaaaacagaagaatacgaagttgggaatgatgcgc
cacctatttcttattgtggattgttccgagtcgatgtctaatcaagacctcaagccgacg
agattatattgcaccattaagctgctcgaacttttcattgaggaattttttgatcaaaac
cccatcagtcaattaggtataataataatgcagaataaacgggcggacagaattagcgag
ttaagtggaaatcctcgcaagcacgtcaaggctattgcaggtttaaatcgtacttcgttg
cttggtgagccgtcattacagaacggtctaaatatggctcttaaatctttgaaattgtta
ccgtcgcatgccagtcgagaggtgttggtgattattggaagtcttacaacatgtgatcct
accgacattaatgttacaattgatgcaatgaaagcggaaggtgttcgatgttcgatagtc
ggtctagctgccgaagtgcacatttgtaaacaactagcatctgaaacaaacggaacatac
aatgtcgttttagacgacagccattataaggatttattatttcaacacgtagaacctcca
cccgcagcattttgtttggaatcgagccttattaaaatgggtttcccccatcagatggta
acggaaggaacagatgaacctctaactatgtgcatgtgtcatgttgatagtgttgatgaa
ggaagtaaactaaccacaggtggctattactgtcctcagtgttgtagcaaatactgcgag
ctacctgtggaatgtagagtttgcggtttaacattagtgtcagcgccacacttagcccgc
tcgtatcatcacttgtttcctgtaggcggttataaagagcgcgaatttaacaaccaagtc
agttcttgttatgcttgccaaaaagtatttggtgaaacggaaaagcaggtgtactgctgt
ttaaagtgtgaaaagatcttttgcattgattgtgatatatttattcacgatacactacat
acatgtccaggctgtgctaccaactcatcagtattacaacataaagcagcttag
DBGET
integrated database retrieval system
