Photinus pyralis (common eastern firefly): 116176510
Help
Entry
116176510 CDS
T07438
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ppyr
Photinus pyralis (common eastern firefly)
Pathway
ppyr03013
Nucleocytoplasmic transport
ppyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116176510
09122 Translation
03013 Nucleocytoplasmic transport
116176510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyr03019
]
116176510
03041 Spliceosome [BR:
ppyr03041
]
116176510
Messenger RNA biogenesis [BR:
ppyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116176510
Spliceosome [BR:
ppyr03041
]
Complex C
Other components
EJC/TREX
116176510
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116176510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
116176510
NCBI-ProteinID:
XP_031350972
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MDLFQSLSSLNHLTVKRDYKELLKDVLVSKDIEPIESKYKSLQNSAVDIRAALDQAFRDV
GLNLLDIDADIERLKNLVRLSIEVCRKEMATTTLPVVLLADIFEGLTLDLCEDMFTFVEE
QVNVWKEELFFTSCKNNLLRMCNDLVRRLSQTSATVLCGRISLFLAKLFPFSERSGLNIV
SEFNLENVTEYGADASEDSVTEIEIAGSKKNIIIDYSLYCKFWSLQDFFRNPNQCYNKVQ
WKVFCSHATSVLSTFEALKLDYVSKDSKDDDDDDKSDDTPYFPKYPTNQKLLDLQIYDVN
FRRSVLVQFLILFQYLTSSVKFKSENHELKSDQKEWVQSGIEKVYVLLRETPPDGEQFTL
NIKNILKREENWNAWKNEGCPDFKASISQPSEKCMKTISERRPLGDVLKEAHAAGKYYLG
NSELTKGWNLSPNNLEACKSKDRDFLPSLENYFAEAIAQLESSTFVKPEDSLLKDGNFGW
RALRLVARRSPHFFTYSNNPINQLPDYLEMMVRKIAADRPGKVQEGNDQNDAELEENLFK
EDEQPTEEIKQEDEFTDDHNMHTIHLRITVSQLNTFSEAIATNWKTIATKLGYTSDEIKF
FEDENPNEVERAKNVLQLWFEDDDDASMENLAYMLEGLDLISAAEVVKAEIAKAV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggatttattccaatcactgtcttctctaaatcacttaacagtgaagagagactataag
gagctgctgaaagatgttctcgtctccaaagacatcgagccgatagaatccaagtacaag
tcattacaaaactcagccgtagacatacgagccgcgttggatcaagcgtttcgcgatgtc
ggccttaaccttctcgatattgacgcggacatcgaacgattaaaaaacttggttagatta
tccattgaagtgtgcaggaaggagatggccacaacgacactacccgtggtccttctcgcc
gatatctttgaaggattgacgctagatttgtgcgaggatatgtttaccttcgtcgaggaa
caagtaaacgtttggaaggaggagctgttcttcacctcgtgcaagaacaacctgctgagg
atgtgtaatgatttagtgagaagactgtcgcagactagcgccactgttttatgtggacga
atttctctattcctcgcgaaattgtttcctttctccgagcgctcgggtctaaatatcgtg
agcgagtttaacttggagaatgtgaccgagtacggggcagatgcctccgaagattctgtc
acggaaattgaaatcgccggttctaagaagaatattataatcgattacagtttgtactgc
aaattttggtcattacaggatttctttcggaatcctaatcagtgttacaataaggtccaa
tggaaagtgttttgctcgcatgcgaccagtgtattgagcacctttgaagcattgaaactc
gattatgtcagtaaggactcaaaggacgacgatgatgatgataagtcagacgatacacca
tattttcccaaatatccgaccaatcagaaactgctagacctgcagatatacgacgttaac
ttccgtcgatctgttctcgtgcaattccttattctgtttcagtatttgacgtcgagtgtt
aaatttaaatcggagaatcacgagctaaaaagtgatcaaaaggagtgggtgcagagcgga
attgaaaaagtctacgttttacttcgcgaaacgccccccgatggggaacagtttaccctt
aacatcaagaatatcttaaaacgcgaggagaattggaatgcgtggaagaatgaaggatgt
cctgatttcaaagcatctatctcccagcctagtgagaagtgtatgaagacaattagtgaa
cgtaggccccttggcgatgtcttaaaggaggcacatgctgccggcaagtactatcttgga
aattccgaactgacgaaaggatggaacttatcaccgaacaatctagaagcttgcaagtcc
aaagatcgcgactttttaccttcattagaaaactatttcgccgaagccatcgcccagcta
gaatcgtcgacgttcgtcaaaccggaggatagtctactgaaagacggcaatttcggctgg
cgcgccttgcgattggtcgcgagacgcagcccccacttcttcacgtacagcaacaacccg
atcaaccaacttcccgactacctggagatgatggttagaaaaatcgccgccgatcgtccg
ggaaaagtgcaggagggtaacgaccaaaacgacgccgagctcgaagagaacctcttcaag
gaggacgagcagcccaccgaggaaattaagcaggaagacgaatttacggacgaccacaat
atgcacactatacatcttagaattaccgttagccaattgaatacgtttagcgaagcaatc
gccaccaattggaagacaatcgcgacgaaactaggttatacatcggacgagatcaagttc
ttcgaagatgagaatccgaatgaagtggaacgagccaagaatgtgttacagttgtggttt
gaagacgatgatgatgcttctatggaaaatttggcttacatgttggaaggtctggatttg
atcagtgcagccgaggtggtgaaagctgaaattgcaaaagcagtttaa
DBGET
integrated database retrieval system
