KEGG   Photinus pyralis (common eastern firefly): 116180988
Entry
116180988         CDS       T07438                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ppyr  Photinus pyralis (common eastern firefly)
Pathway
ppyr03030  DNA replication
ppyr03410  Base excision repair
ppyr03420  Nucleotide excision repair
ppyr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116180988
   03410 Base excision repair
    116180988
   03420 Nucleotide excision repair
    116180988
   03430 Mismatch repair
    116180988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppyr03032]
    116180988
   03400 DNA repair and recombination proteins [BR:ppyr03400]
    116180988
Enzymes [BR:ppyr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     116180988
    6.5.1.6  DNA ligase (ATP or NAD+)
     116180988
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     116180988
DNA replication proteins [BR:ppyr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    116180988
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     116180988
DNA repair and recombination proteins [BR:ppyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     116180988
   NER (nucleotide excision repair)
    Other NER factors
     116180988
   MMR (mismatch excision repair)
    Other MMR factors
     116180988
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme FERM_N_2
Other DBs
NCBI-GeneID: 116180988
NCBI-ProteinID: XP_031357055
LinkDB
Position
Unknown
AA seq 806 aa
MSQKSITSFFAPTQKNSDKSGTKPQNNEGGYVILNNESSSSESNKSPHGSDTSKENNRSL
RTNASRRSAKLVLTGSRGLKPEIAKIMQERREKQSLSSDSDDSDEINLKKTKKKRRLDSS
SDEDNKQKKAQLVQCSEQESKIVTEVAAKVNDWAYNPTITNYHPLDNAVWKQFESVPYMA
LARTLSEIENISARLKTIEILSNFFRSVIVLSPLDLLPSIYLCLNKLAPAYEGLELGIAE
TNLMKAIAQSTGRTIAQIKTDAKAAGDLGIVAEQSRSNQKMIFQPSRLTIKGVFDKLKEI
AKMTGHASQTKKVEKIQSMFVACRNCEARFLIRSLAGKLRVGLAEQSVLQALALACAKTP
PGQSYPPEQLNMAKTMSADSFKGEYETQALILKTTYCECPNYDLIVPVILREGIRKLPDH
CKLTPGIPLKPMLAHPTKGVHEVLQRFEGLKFTCEWKYDGERAQIHIDQDGSISIYSRNQ
ENNTSKYPDVINRLDACKGDKVRSCILDCEAVAWDKENRHILPFQILSTRKRKDANEDEI
KVQVCVFMFDLLYINGEPLVKRPFKERRELLRENFKEVDGQWLFATFLDTTVMEEVQDFL
EESVKGKCEGLMVKTLEEDATYEIAKRSRNWLKLKKDYLEGVGDTLDVVVLGGYLGRGKR
TGTYGGFLLGCYDRENEEYQSICKIGTGFSDEALQAHTTFFENHILSHPKSYYRYDASHE
PDHWFDAVQVWEIKCADLSLSPVHRAALGIVDPEKGISLRFPRFVRIREDKGVEDATSAK
QVADMYVNQDQIKDQQKHKIAEEDFY
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtctcaaaaaagtattacttctttctttgctccaacccaaaagaattcggataaaagt
ggtacaaaaccacaaaacaacgaaggcgggtatgtaattttaaacaatgagagctcatca
tccgagtcgaacaaaagtcctcacggatcagacacttcgaaagaaaacaatcgcagttta
cgaactaatgcatctcgtagatctgcaaaactggtgctcaccggcagcagaggtttaaag
ccggaaattgccaaaattatgcaagagaggcgtgaaaagcagtctttgtcatctgacagt
gacgatagtgacgaaattaatttgaaaaaaacaaaaaagaagaggaggctggattcgagt
tcagacgaggacaataaacagaagaaggcgcaattggtacaatgttctgaacaggaatca
aaaattgtaactgaagttgctgcaaaagtaaacgattgggcctacaatcctacaataacg
aattatcatccgctggataatgccgtttggaaacagttcgagagcgtaccttacatggct
cttgcacgtactcttagtgaaattgaaaatatatcggctcgtttgaaaacgatcgagatt
ttaagtaacttttttcgctctgtaattgtactaagtccacttgatctattgccgtcgatc
tatctatgcctgaacaaactggcccccgcttacgaaggtttagagttggggatagcagag
accaatttgatgaaagcgatcgctcaatccactggacgtaccatcgctcaaattaagacg
gatgccaaagccgccggtgatttgggcattgttgcggagcaatcacgtagcaatcaaaag
atgatattccaaccgtcgcggttaaccatcaagggcgtctttgataaactgaaggagatc
gcaaagatgacggggcacgcgtcgcagacaaagaaagtagaaaaaatccaaagtatgttt
gtggcatgtcgaaattgcgaggctagatttttgattcgttccctggccggaaagctcaga
gtcggtttggccgagcagtccgtgctacaagctttggcactggcctgcgccaagactcct
ccaggtcagtcgtatccgcccgaacaattaaatatggcaaaaaccatgtccgcggattca
tttaagggagaatacgaaacgcaggctttaattttgaaaaccacgtactgcgaatgtccc
aattacgacttgatcgtacccgtaattttgagggagggtattcgaaagttacccgaccat
tgcaagttgacacccggcatacctctaaagcccatgttggcacatccgactaaaggtgta
cacgaagttttacaaagattcgaagggttgaaattcacgtgcgaatggaagtacgacgga
gagcgtgcacaaattcatatcgatcaagatggttcaattagtatttatagtcgtaatcag
gaaaacaacacttccaagtatcccgatgttataaatcgtttagatgcgtgtaaaggcgat
aaagttcggtcgtgcatactcgattgtgaggcggtagcgtgggataaggaaaatcggcat
attttgccattccaaatactcagcactagaaagcgtaaggacgccaacgaggatgagatt
aaagttcaagtttgcgtatttatgttcgatctgttatacatcaacggagagcctctggtg
aaaagaccatttaaggaacgcagggagttgcttagggagaattttaaggaggtcgatggc
cagtggcttttcgccacgtttttggacacgactgtaatggaagaagttcaggatttcctc
gaggaaagtgtgaagggtaagtgcgagggtttaatggttaaaactctcgaggaagatgcg
acttacgaaattgcaaagaggtctcgtaactggttaaagcttaagaaagactacttggaa
ggcgtcggggatactctggacgttgtcgtattgggcggttacttgggccgtgggaaacga
accggcacttacggcggttttctgctcggttgctacgatcgagagaatgaagaataccag
agcatctgtaagatcggtactggatttagtgatgaggcattacaagcgcatacaacattt
ttcgaaaatcacattttaagccatccaaaatcatactatcggtacgatgcttcgcacgaa
cccgatcactggtttgatgccgttcaggtgtgggaaattaagtgcgcggacttgtcgctg
tcgccagtacatcgtgccgcacttggaattgtggaccccgaaaaaggaatatcgcttcgt
tttccacgatttgtacgaattcgcgaggacaagggtgttgaagatgcgacttccgccaaa
caagttgccgatatgtatgtcaatcaagatcaaattaaagatcaacagaagcataagatc
gcagaggaggacttttattag

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